RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 OVGP1Q12889 678 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 CNGA2Q16280 664 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 MDH1BQ5I0G3 518 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 LVRNQ6Q4G3 990 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 SYDE1Q6ZW31 735 aaPredicted RBP9.76□□□□□ -0.85
COL21A1-201ENST00000244728 RBM46Q8TBY0 533 aaKnown RBP9.76□□□□□ -0.85
COL21A1-201ENST00000244728 MAGEB18Q96M61 343 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 SIK2Q9H0K1 926 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 CTNNAL1Q9UBT7 734 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 SLIT3O75094 1523 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 FER1L4A9Z1Z3 1794 aa9.76□□□□□ -0.85
COL21A1-201ENST00000244728 EML1O00423 815 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 KIAA0391O15091 583 aaKnown RBP9.75□□□□□ -0.85
COL21A1-201ENST00000244728 LPXNO60711 386 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 SGPL1O95470 568 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 ICAM1P05362 532 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 PYGMP11217 842 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 VCAM1P19320 739 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 SREBF1P36956 1147 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 EPHB1P54762 984 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 SH2D4BQ5SQS7 431 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 ARMCX2Q7L311 632 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 ZNF572Q7Z3I7 529 aaPredicted RBP9.75□□□□□ -0.85
COL21A1-201ENST00000244728 METTL23Q86XA0 190 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 C1orf131Q8NDD1 294 aaKnown RBP9.75□□□□□ -0.85
COL21A1-201ENST00000244728 ACSF2Q96CM8 615 aaPredicted RBP9.75□□□□□ -0.85
COL21A1-201ENST00000244728 FAF2Q96CS3 445 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 FGFBP2Q9BYJ0 223 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 NDE1Q9NXR1 346 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 TRAF3IP3Q9Y228 551 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 CCDC195A0A1B0GUA6 201 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 TTC4O95801 387 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 C6orf222P0C671 652 aaPredicted RBP9.75□□□□□ -0.85
COL21A1-201ENST00000244728 RALAP11233 206 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 RANBP1P43487 201 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 AUHQ13825 339 aaKnown RBP9.75□□□□□ -0.85
COL21A1-201ENST00000244728 MAP3K21Q5TCX8 1036 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 C1orf228Q6PIY5 440 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 CRELD2Q6UXH1 353 aaPredicted RBP9.75□□□□□ -0.85
COL21A1-201ENST00000244728 OSBPL8Q9BZF1 889 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 FAM49BQ9NUQ9 324 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 IRAK4Q9NWZ3 460 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 TRIM33Q9UPN9 1127 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 GNAT1P11488 350 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 SDC4P31431 198 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 PRKCIP41743 596 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 CPA2P48052 419 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 SERPINB4P48594 390 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 KDSRQ06136 332 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 RCN1Q15293 331 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 ATP11CQ8NB49 1132 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 ATXN2LQ8WWM7 1075 aaKnown RBP9.75□□□□□ -0.85
COL21A1-201ENST00000244728 CDKL2Q92772 493 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 DHX35Q9H5Z1 703 aaKnown RBP9.75□□□□□ -0.85
COL21A1-201ENST00000244728 TAS2R14Q9NYV8 317 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 NAALADL1Q9UQQ1 740 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 PIN4Q9Y237 131 aaKnown RBP9.75□□□□□ -0.85
COL21A1-201ENST00000244728 EIF3DO15371 548 aaKnown RBP eCLIP9.75□□□□□ -0.85
COL21A1-201ENST00000244728 OATP04181 439 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 GSTA2P09210 222 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 UBTFL6P0CB48 400 aaPredicted RBP9.75□□□□□ -0.85
COL21A1-201ENST00000244728 RARAP10276 462 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 CDH6P55285 790 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 CACNB2Q08289 660 aaPredicted RBP9.75□□□□□ -0.85
COL21A1-201ENST00000244728 NME3Q13232 169 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 SEPT6Q14141 434 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 HIF1AQ16665 826 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 DUPD1Q68J44 220 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 NLRP9Q7RTR0 991 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 Q9H521 79 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 SLC12A6Q9UHW9 1150 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 GTF3C4Q9UKN8 822 aa9.75□□□□□ -0.85
COL21A1-201ENST00000244728 TNPO2O14787 897 aaKnown RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 NKRFO15226 690 aaKnown RBP eCLIP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 MAP3K6O95382 1288 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 ABCD1P33897 745 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 MARCKSL1P49006 195 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 CLCN3P51790 818 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 BACE1P56817 501 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 DGKZQ13574 1117 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 LRRC36Q1X8D7 754 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 SMTNL2Q2TAL5 461 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 KLHL38Q2WGJ6 581 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 CRLF3Q8IUI8 442 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 PPM1NQ8N819 430 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 RBBP8NLQ8NC74 664 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 GSDMBQ8TAX9 411 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 RNF139Q8WU17 664 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 TSSK1BQ9BXA7 367 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 FAM198AQ9UFP1 575 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 LRFN2Q9ULH4 789 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 LRRC37A3O60309 1634 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 UBR1Q8IWV7 1749 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 MOCS2O96007 188 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 ENO1P06733 434 aaKnown RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 NUDT17P0C025 328 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 KRT3P12035 628 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 TBXAS1P24557 533 aaPredicted RBP9.74□□□□□ -0.85
COL21A1-201ENST00000244728 VHLP40337 213 aa9.74□□□□□ -0.85
COL21A1-201ENST00000244728 GSCP56915 257 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms