RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 FAXDC2Q96IV6 333 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 SDCBP2Q9H190 292 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 NEUROG2Q9H2A3 272 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.66■□□□□ 0.74
HOXC11-201ENST00000243082 PCDHGC3Q9UN70 934 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 DAPK3O43293 454 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 GPR32O75388 356 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 CDH5P33151 784 aaPredicted RBP19.66■□□□□ 0.74
HOXC11-201ENST00000243082 CYP2C19P33261 490 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 CDH8P55286 799 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 YWHAEP62258 255 aaKnown RBP19.66■□□□□ 0.74
HOXC11-201ENST00000243082 DR1Q01658 176 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 HLTFQ14527 1009 aaKnown RBP eCLIP19.66■□□□□ 0.74
HOXC11-201ENST00000243082 SIX1Q15475 284 aaPredicted RBP19.66■□□□□ 0.74
HOXC11-201ENST00000243082 ALS2CLQ60I27 953 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 TLK2Q86UE8 772 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 C1orf131Q8NDD1 294 aaKnown RBP19.66■□□□□ 0.74
HOXC11-201ENST00000243082 TRIM51Q9BSJ1 452 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 ADAM21Q9UKJ8 722 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 UTP11Q9Y3A2 253 aaKnown RBP19.66■□□□□ 0.74
HOXC11-201ENST00000243082 SCINQ9Y6U3 715 aa19.66■□□□□ 0.74
HOXC11-201ENST00000243082 NRCAMQ92823 1304 aa19.65■□□□□ 0.74
HOXC11-201ENST00000243082 HOXA11P31270 313 aaPredicted RBP19.65■□□□□ 0.74
HOXC11-201ENST00000243082 TMEM62Q0P6H9 643 aa19.65■□□□□ 0.74
HOXC11-201ENST00000243082 DHX34Q14147 1143 aaKnown RBP19.65■□□□□ 0.74
HOXC11-201ENST00000243082 TMEM35BQ8NCS4 154 aa19.65■□□□□ 0.74
HOXC11-201ENST00000243082 C18orf8Q96DM3 657 aa19.65■□□□□ 0.74
HOXC11-201ENST00000243082 DDX27Q96GQ7 796 aaKnown RBP19.65■□□□□ 0.74
HOXC11-201ENST00000243082 ACAP3Q96P50 834 aa19.65■□□□□ 0.74
HOXC11-201ENST00000243082 ZNF518BQ9C0D4 1074 aa19.65■□□□□ 0.74
HOXC11-201ENST00000243082 FAM49AQ9H0Q0 323 aaPredicted RBP19.65■□□□□ 0.74
HOXC11-201ENST00000243082 VRTNQ9H8Y1 702 aa19.65■□□□□ 0.74
HOXC11-201ENST00000243082 CDHR5Q9HBB8 845 aa19.65■□□□□ 0.74
HOXC11-201ENST00000243082 PARVAQ9NVD7 372 aa19.65■□□□□ 0.74
HOXC11-201ENST00000243082 TCRBV5S1A1TA0A578 114 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 MBLAC1A4D2B0 266 aaPredicted RBP19.64■□□□□ 0.74
HOXC11-201ENST00000243082 RNF40O75150 1001 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 GJB6O95452 261 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 RARAP10276 462 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 EIF4BP23588 611 aaKnown RBP19.64■□□□□ 0.74
HOXC11-201ENST00000243082 ATICP31939 592 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 CHRNA3P32297 505 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 PTGIRP43119 386 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 DMTNQ08495 405 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 HIC1Q14526 733 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 TMEM132DQ14C87 1099 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 CYP1B1Q16678 543 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 DAB2IPQ5VWQ8 1189 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 CHADLQ6NUI6 762 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 TTC27Q6P3X3 843 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 IQCKQ8N0W5 287 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 FEZF2Q8TBJ5 459 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 MAGOHBQ96A72 148 aaKnown RBP19.64■□□□□ 0.74
HOXC11-201ENST00000243082 ADPGKQ9BRR6 497 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 PCYOX1Q9UHG3 505 aa19.64■□□□□ 0.74
HOXC11-201ENST00000243082 PCNTO95613 3336 aa19.64■□□□□ 0.73
HOXC11-201ENST00000243082 TRPM7Q96QT4 1865 aa19.64■□□□□ 0.73
HOXC11-201ENST00000243082 FAM187AA6NFU0 413 aa19.64■□□□□ 0.73
HOXC11-201ENST00000243082 FSCN2O14926 492 aa19.64■□□□□ 0.73
HOXC11-201ENST00000243082 TLR3O15455 904 aaKnown RBP19.64■□□□□ 0.73
HOXC11-201ENST00000243082 GRM5P41594 1212 aa19.64■□□□□ 0.73
HOXC11-201ENST00000243082 DUPD1Q68J44 220 aa19.64■□□□□ 0.73
HOXC11-201ENST00000243082 IFNL1Q8IU54 200 aa19.64■□□□□ 0.73
HOXC11-201ENST00000243082 SH3GL2Q99962 352 aa19.64■□□□□ 0.73
HOXC11-201ENST00000243082 ERP44Q9BS26 406 aa19.64■□□□□ 0.73
HOXC11-201ENST00000243082 SMYD3Q9H7B4 428 aa19.64■□□□□ 0.73
HOXC11-201ENST00000243082 FAM114A2Q9NRY5 505 aa19.64■□□□□ 0.73
HOXC11-201ENST00000243082 C2CD2Q9Y426 696 aa19.64■□□□□ 0.73
HOXC11-201ENST00000243082 SMIM35A0A1B0GVV1 85 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 CALB1P05937 261 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 CYP2B6P20813 491 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 POLR2BP30876 1174 aaKnown RBP19.63■□□□□ 0.73
HOXC11-201ENST00000243082 HSPA9P38646 679 aaKnown RBP19.63■□□□□ 0.73
HOXC11-201ENST00000243082 RAD23BP54727 409 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 ADAM17P78536 824 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 LACTBP83111 547 aaPredicted RBP19.63■□□□□ 0.73
HOXC11-201ENST00000243082 MFSD10Q14728 455 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 RUFY4Q6ZNE9 571 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 SAPCD2Q86UD0 394 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 JAMLQ86YT9 394 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 PIK3R5Q8WYR1 880 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 ZIM3Q96PE6 472 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 GCOM2Q9BZD3 368 aaPredicted RBP19.63■□□□□ 0.73
HOXC11-201ENST00000243082 RAB17Q9H0T7 212 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 DPH5Q9H2P9 285 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 GJD2Q9UKL4 321 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 GINS2Q9Y248 185 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 TMEM191CA6NGB0 347 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 O00370 1275 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 HSF2BPO75031 334 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 IGHA2P01877 340 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 PAEPP09466 180 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 RPL7AP62424 266 aaKnown RBP19.63■□□□□ 0.73
HOXC11-201ENST00000243082 CDC42EP1Q00587 391 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 RGMBQ6NW40 437 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 DENND1BQ6P3S1 775 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 TWNKQ96RR1 684 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 PLVAPQ9BX97 442 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 MTUS1Q9ULD2 1270 aa19.63■□□□□ 0.73
HOXC11-201ENST00000243082 AGAP1Q9UPQ3 857 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 204.8 ms