RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 F8VZ95 297 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 PODXLO00592 558 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 HBP1O60381 514 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 SERPINB3P29508 390 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 GIT2Q14161 759 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 PASD1Q8IV76 773 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 MORC4Q8TE76 937 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 PDCD2LQ9BRP1 358 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 MAD1L1Q9Y6D9 718 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 A8MXQ7 604 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 P4HA2O15460 535 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 SLC4A1P02730 911 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 PGK2P07205 417 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 UBTFL6P0CB48 400 aaPredicted RBP11.56□□□□□ -0.56
COPA-201ENST00000241704 PSMA2P25787 234 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 ERVK-9P63128 1117 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 TSTA3Q13630 321 aaPredicted RBP11.56□□□□□ -0.56
COPA-201ENST00000241704 CDO1Q16878 200 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 SLC44A4Q53GD3 710 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 KLHDC7AQ5VTJ3 777 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 ZNF570Q96NI8 536 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 ZCWPW1Q9H0M4 648 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 RMI1Q9H9A7 625 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 ATXN10Q9UBB4 475 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 IPO11Q9UI26 975 aaKnown RBP11.56□□□□□ -0.56
COPA-201ENST00000241704 CHMP2BQ9UQN3 213 aa11.56□□□□□ -0.56
COPA-201ENST00000241704 RRN3P2A6NIE6 340 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 RNF225M0QZC1 329 aaPredicted RBP11.55□□□□□ -0.56
COPA-201ENST00000241704 PDHXO00330 501 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 TADA2AO75478 443 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 ACOT2P49753 483 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 PEX5P50542 639 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 NCALDP61601 193 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 GRAMD4Q6IC98 578 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 WDR59Q6PJI9 974 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 TTC30AQ86WT1 665 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 ZMAT2Q96NC0 199 aaKnown RBP11.55□□□□□ -0.56
COPA-201ENST00000241704 NUP85Q9BW27 656 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.55□□□□□ -0.56
COPA-201ENST00000241704 FNDC3AQ9Y2H6 1198 aaKnown RBP11.55□□□□□ -0.56
COPA-201ENST00000241704 WFS1O76024 890 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 ATN1P54259 1190 aaPredicted RBP11.55□□□□□ -0.56
COPA-201ENST00000241704 LMBRD2Q68DH5 695 aaPredicted RBP11.55□□□□□ -0.56
COPA-201ENST00000241704 ZFAND2BQ8WV99 257 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 EPAS1Q99814 870 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 AGPAT3Q9NRZ7 376 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 CYP26A1O43174 497 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 ATP9AO75110 1047 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 SRGAP2BP0DMP2 458 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 NFKBIAP25963 317 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 GSTT1P30711 240 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 DYNLT1P63172 113 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 AFG1LQ8WV93 481 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 SYN2Q92777 582 aaPredicted RBP11.55□□□□□ -0.56
COPA-201ENST00000241704 CDCA5Q96FF9 252 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 PABPC3Q9H361 631 aaKnown RBP11.55□□□□□ -0.56
COPA-201ENST00000241704 TRIM17Q9Y577 477 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 GOLGA8CPA6NN73 597 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 RSPH10B2B2RC85 870 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 ZWINTO95229 277 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 ACSL3O95573 720 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 KRT16P08779 473 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 RSPH10BP0C881 870 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 ESRRAP11474 423 aaPredicted RBP11.55□□□□□ -0.56
COPA-201ENST00000241704 ZBTB17Q13105 803 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 PDE1CQ14123 709 aaPredicted RBP11.55□□□□□ -0.56
COPA-201ENST00000241704 WASHC2DQ5SRD0 308 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 PPP1R15BQ5SWA1 713 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 RWDD4Q6NW29 188 aaKnown RBP11.55□□□□□ -0.56
COPA-201ENST00000241704 CAPN12Q6ZSI9 719 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 KSR1Q8IVT5 923 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 PCSK9Q8NBP7 692 aaKnown RBP11.55□□□□□ -0.56
COPA-201ENST00000241704 TMEM165Q9HC07 324 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 CYP39A1Q9NYL5 469 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 TBK1Q9UHD2 729 aa11.55□□□□□ -0.56
COPA-201ENST00000241704 GMNNO75496 209 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 IMPDH2P12268 514 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 CYLC2Q14093 348 aaPredicted RBP11.54□□□□□ -0.56
COPA-201ENST00000241704 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.54□□□□□ -0.56
COPA-201ENST00000241704 PXMP2Q9NR77 195 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 TMEM120BA0PK00 339 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 DSG3P32926 999 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 DNAAF3Q8N9W5 541 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 NDNQ99608 321 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 TRIM51Q9BSJ1 452 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 SEMA6BQ9H3T3 888 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 CYP26B1Q9NR63 512 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 ARHGAP20Q9P2F6 1191 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 SNX3O60493 162 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 TJP3O95049 919 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 USP4Q13107 963 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 DHX34Q14147 1143 aaKnown RBP11.54□□□□□ -0.56
COPA-201ENST00000241704 DEFB115Q30KQ5 88 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 TMC3Q7Z5M5 1100 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 GPRC5DQ9NZD1 345 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 IL1RAPL1Q9NZN1 696 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 DBR1Q9UK59 544 aaKnown RBP11.54□□□□□ -0.56
COPA-201ENST00000241704 PAEPP09466 180 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 KLRC1P26715 233 aa11.54□□□□□ -0.56
COPA-201ENST00000241704 NNMTP40261 264 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms