RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 SGSM1Q2NKQ1 1148 aa14□□□□□ -0.17
NEK4-201ENST00000233027 NSL1Q96IY1 281 aa14□□□□□ -0.17
NEK4-201ENST00000233027 TIPINQ9BVW5 301 aa14□□□□□ -0.17
NEK4-201ENST00000233027 ZNF212Q9UDV6 495 aa14□□□□□ -0.17
NEK4-201ENST00000233027 PRKAG2Q9UGJ0 569 aa14□□□□□ -0.17
NEK4-201ENST00000233027 HERC5Q9UII4 1024 aaKnown RBP14□□□□□ -0.17
NEK4-201ENST00000233027 SERPINB9P50453 376 aa14□□□□□ -0.17
NEK4-201ENST00000233027 ASAP3Q8TDY4 903 aa14□□□□□ -0.17
NEK4-201ENST00000233027 ZBED2Q9BTP6 218 aa14□□□□□ -0.17
NEK4-201ENST00000233027 TMEM8AQ9HCN3 771 aa14□□□□□ -0.17
NEK4-201ENST00000233027 DLGAP2Q9P1A6 1054 aa14□□□□□ -0.17
NEK4-201ENST00000233027 TJP2Q9UDY2 1190 aa14□□□□□ -0.17
NEK4-201ENST00000233027 PRR12Q9ULL5 1215 aa14□□□□□ -0.17
NEK4-201ENST00000233027 PXDNLA1KZ92 1463 aa14□□□□□ -0.17
NEK4-201ENST00000233027 SUPT3HB4E1H0 165 aa14□□□□□ -0.17
NEK4-201ENST00000233027 ZBTB39O15060 712 aa14□□□□□ -0.17
NEK4-201ENST00000233027 PLOD1Q02809 727 aaPredicted RBP14□□□□□ -0.17
NEK4-201ENST00000233027 C6orf10Q5SRN2 563 aa14□□□□□ -0.17
NEK4-201ENST00000233027 CDC42EP5Q6NZY7 148 aa14□□□□□ -0.17
NEK4-201ENST00000233027 SPATA2LQ8IUW3 424 aaPredicted RBP14□□□□□ -0.17
NEK4-201ENST00000233027 KIAA2013Q8IYS2 634 aa14□□□□□ -0.17
NEK4-201ENST00000233027 B4GALNT2Q8NHY0 566 aa14□□□□□ -0.17
NEK4-201ENST00000233027 ATG4AQ8WYN0 398 aa14□□□□□ -0.17
NEK4-201ENST00000233027 MAP3K14Q99558 947 aa14□□□□□ -0.17
NEK4-201ENST00000233027 FUT8Q9BYC5 575 aa14□□□□□ -0.17
NEK4-201ENST00000233027 C2CD6Q53TS8 623 aa14□□□□□ -0.17
NEK4-201ENST00000233027 FAXCQ5TGI0 409 aa14□□□□□ -0.17
NEK4-201ENST00000233027 E2F7Q96AV8 911 aa14□□□□□ -0.17
NEK4-201ENST00000233027 SNRPAP09012 282 aaKnown RBP13.99□□□□□ -0.17
NEK4-201ENST00000233027 GEMIN4P57678 1058 aaKnown RBP13.99□□□□□ -0.17
NEK4-201ENST00000233027 HERVK_113P62684 666 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 PRKCEQ02156 737 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 GOLGA7BQ2TAP0 167 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 KDM7AQ6ZMT4 941 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 PALMDQ9NP74 551 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 EIF3DO15371 548 aaKnown RBP eCLIP13.99□□□□□ -0.17
NEK4-201ENST00000233027 SGPL1O95470 568 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 TRPC1P48995 793 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 PTK2BQ14289 1009 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 EZH2Q15910 746 aaKnown RBP13.99□□□□□ -0.17
NEK4-201ENST00000233027 KCNK16Q96T55 309 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 TRIM54Q9BYV2 358 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 ZBTB12Q9Y330 459 aaPredicted RBP13.99□□□□□ -0.17
NEK4-201ENST00000233027 CAPN6Q9Y6Q1 641 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 INO80Q9ULG1 1556 aaPredicted RBP13.99□□□□□ -0.17
NEK4-201ENST00000233027 CAND2O75155 1236 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.17
NEK4-201ENST00000233027 RBP5P82980 135 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 KRT72Q14CN4 511 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 XKR3Q5GH77 459 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 SLC30A9Q6PML9 568 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 OR6J1Q8NGC5 347 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 AP5Z1O43299 807 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 KLHL2O95198 593 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 CHRNA5P30532 468 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 CENPCQ03188 943 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 CYB5D1Q6P9G0 228 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 CCDC33Q8N5R6 958 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 ZFYVE19Q96K21 471 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 AVPR1AP37288 418 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 TNS3Q68CZ2 1445 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 FEZF2Q8TBJ5 459 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 HNRNPLLQ8WVV9 542 aaKnown RBP13.99□□□□□ -0.17
NEK4-201ENST00000233027 PABPC5Q96DU9 382 aaKnown RBP13.99□□□□□ -0.17
NEK4-201ENST00000233027 ERGIC2Q96RQ1 377 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 RUSC1Q9BVN2 902 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 PAK5Q9P286 719 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 WDR35Q9P2L0 1181 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 HAO1Q9UJM8 370 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 PHTF1Q9UMS5 762 aa13.99□□□□□ -0.17
NEK4-201ENST00000233027 ZNF772Q68DY9 489 aaPredicted RBP13.98□□□□□ -0.17
NEK4-201ENST00000233027 APOBEC3FQ8IUX4 373 aaKnown RBP13.98□□□□□ -0.17
NEK4-201ENST00000233027 LRRC71Q8N4P6 559 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 FAM111AQ96PZ2 611 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 HPS4Q9NQG7 708 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 TBX3O15119 743 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 PYGLP06737 847 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 GPD1P21695 349 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 PON1P27169 355 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 CTCFP49711 727 aaPredicted RBP13.98□□□□□ -0.17
NEK4-201ENST00000233027 FBXW4P57775 412 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 ORC1Q13415 861 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 DNAAF5Q86Y56 855 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 PLD3Q8IV08 490 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 PPIL6Q8IXY8 311 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 IPMKQ8NFU5 416 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 UNC13BO14795 1591 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.98□□□□□ -0.17
NEK4-201ENST00000233027 RSPH10B2B2RC85 870 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 TBC1D4O60343 1298 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 RSPH10BP0C881 870 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 KYAT1Q16773 422 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 SEZ6Q53EL9 994 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 SLC7A14Q8TBB6 771 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 CMTM5Q96DZ9 223 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 C17orf80Q9BSJ5 609 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 PCDHB2Q9Y5E7 798 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 RARBP10826 455 aa13.98□□□□□ -0.17
NEK4-201ENST00000233027 ABCE1P61221 599 aaKnown RBP13.98□□□□□ -0.17
NEK4-201ENST00000233027 GRB10Q13322 594 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms