RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 TAL1P17542 331 aaPredicted RBP8.43□□□□□ -1.06
NANOG-201ENST00000229307 CTNNA1P35221 906 aaKnown RBP8.43□□□□□ -1.06
NANOG-201ENST00000229307 CDH6P55285 790 aa8.43□□□□□ -1.06
NANOG-201ENST00000229307 OXCT1P55809 520 aa8.43□□□□□ -1.06
NANOG-201ENST00000229307 ATP11AP98196 1134 aa8.43□□□□□ -1.06
NANOG-201ENST00000229307 PTPN11Q06124 597 aaPredicted RBP8.43□□□□□ -1.06
NANOG-201ENST00000229307 IQCB1Q15051 598 aa8.43□□□□□ -1.06
NANOG-201ENST00000229307 TMEM119Q4V9L6 283 aa8.43□□□□□ -1.06
NANOG-201ENST00000229307 CCDC13Q8IYE1 715 aa8.43□□□□□ -1.06
NANOG-201ENST00000229307 SLC7A14Q8TBB6 771 aa8.43□□□□□ -1.06
NANOG-201ENST00000229307 MTMR12Q9C0I1 747 aa8.43□□□□□ -1.06
NANOG-201ENST00000229307 CDC23Q9UJX2 597 aa8.43□□□□□ -1.06
NANOG-201ENST00000229307 HEY1Q9Y5J3 304 aa8.43□□□□□ -1.06
NANOG-201ENST00000229307 CHD4Q14839 1912 aa8.43□□□□□ -1.06
NANOG-201ENST00000229307 DFFAO00273 331 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 PODXLO00592 558 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 AOC2O75106 756 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 PSMD10O75832 226 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 WEE2P0C1S8 567 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 LAG3P18627 525 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 ETFBP38117 255 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 DMTNQ08495 405 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 SLMAPQ14BN4 828 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 KRT71Q3SY84 523 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 KLC3Q6P597 504 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 CENPUQ71F23 418 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 SRRM1Q8IYB3 904 aaKnown RBP8.42□□□□□ -1.06
NANOG-201ENST00000229307 HHIPL1Q96JK4 782 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 TLR8Q9NR97 1041 aaKnown RBP8.42□□□□□ -1.06
NANOG-201ENST00000229307 SETSIPP0DME0 302 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 UCHL3P15374 230 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 SAT1P21673 171 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 GPD1P21695 349 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 DNAJB2P25686 324 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 ROR1Q01973 937 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 APBA1Q02410 837 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 BRD3Q15059 726 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 RPS6KA2Q15349 733 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 KCNA10Q16322 511 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 NOMO2Q5JPE7 1267 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 SH3BP5LQ7L8J4 393 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 KSR1Q8IVT5 923 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 CCDC60Q8IWA6 550 aaPredicted RBP8.42□□□□□ -1.06
NANOG-201ENST00000229307 LRRC43Q8N309 656 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 ATPAF2Q8N5M1 289 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 ACRBPQ8NEB7 543 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 USP13Q92995 863 aaPredicted RBP8.42□□□□□ -1.06
NANOG-201ENST00000229307 ZNF518BQ9C0D4 1074 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 SLC28A3Q9HAS3 691 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 KCNMB3Q9NPA1 279 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.42□□□□□ -1.06
NANOG-201ENST00000229307 GIT1Q9Y2X7 761 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 V9GYY5 206 aaPredicted RBP8.42□□□□□ -1.06
NANOG-201ENST00000229307 SF3B1O75533 1304 aaKnown RBP eCLIP8.42□□□□□ -1.06
NANOG-201ENST00000229307 EEF2KO00418 725 aaKnown RBP8.42□□□□□ -1.06
NANOG-201ENST00000229307 ICAM3P32942 547 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 CAV1Q03135 178 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 CDH18Q13634 790 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 GPAT2Q6NUI2 795 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 SDCCAG8Q86SQ7 713 aaPredicted RBP8.42□□□□□ -1.06
NANOG-201ENST00000229307 C7orf61Q8IZ16 206 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 RCOR2Q8IZ40 523 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 CYP2W1Q8TAV3 490 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 TRAPPC12Q8WVT3 735 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 RIN2Q8WYP3 895 aaPredicted RBP8.42□□□□□ -1.06
NANOG-201ENST00000229307 PPP1R13BQ96KQ4 1090 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 HDAC6Q9UBN7 1215 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 Q9Y3F1 56 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 ITIH6Q6UXX5 1313 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.42□□□□□ -1.06
NANOG-201ENST00000229307 MYL4P12829 197 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 NCAM1P13591 858 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 VEGFBP49765 207 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 AP1B1Q10567 949 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 ZNF177Q13360 481 aaPredicted RBP8.42□□□□□ -1.06
NANOG-201ENST00000229307 PABPC1LQ4VXU2 614 aaKnown RBP8.42□□□□□ -1.06
NANOG-201ENST00000229307 IL31Q6EBC2 164 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 SCFD1Q8WVM8 642 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 INPP4AQ96PE3 977 aaPredicted RBP8.42□□□□□ -1.06
NANOG-201ENST00000229307 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.42□□□□□ -1.06
NANOG-201ENST00000229307 TNFSF13BQ9Y275 285 aa8.42□□□□□ -1.06
NANOG-201ENST00000229307 GOLGA8QA0A0J9YX86 632 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 GOLGA8OA6NCC3 632 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 F5H5T6 163 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 GOLGA8NF8WBI6 632 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 TRIM66O15016 1216 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 ADH1AP07327 375 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 SLC10A3P09131 477 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 CKBP12277 381 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 PSRC1Q6PGN9 363 aaPredicted RBP8.41□□□□□ -1.06
NANOG-201ENST00000229307 RASGRP2Q7LDG7 609 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 TRIM42Q8IWZ5 723 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 CSGALNACT1Q8TDX6 532 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 SCG3Q8WXD2 468 aaKnown RBP8.41□□□□□ -1.06
NANOG-201ENST00000229307 ATP6V1E2Q96A05 226 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 SYT15Q9BQS2 421 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 BTBD7Q9P203 1132 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 SLC25A13Q9UJS0 675 aa8.41□□□□□ -1.06
NANOG-201ENST00000229307 FNDC3AQ9Y2H6 1198 aaKnown RBP8.41□□□□□ -1.06
NANOG-201ENST00000229307 MTSS1O43312 755 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms