RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 TRAPPC12Q8WVT3 735 aa14□□□□□ -0.17
COPS7A-201ENST00000229251 ZNF653Q96CK0 615 aa14□□□□□ -0.17
COPS7A-201ENST00000229251 ANKRD36BP1Q96IX9 119 aa14□□□□□ -0.17
COPS7A-201ENST00000229251 ARID3AQ99856 593 aa14□□□□□ -0.17
COPS7A-201ENST00000229251 NIF3L1Q9GZT8 377 aa14□□□□□ -0.17
COPS7A-201ENST00000229251 TSPYL2Q9H2G4 693 aaPredicted RBP14□□□□□ -0.17
COPS7A-201ENST00000229251 GOLPH3Q9H4A6 298 aa14□□□□□ -0.17
COPS7A-201ENST00000229251 APOBEC3GQ9HC16 384 aaKnown RBP14□□□□□ -0.17
COPS7A-201ENST00000229251 EHD2Q9NZN4 543 aa14□□□□□ -0.17
COPS7A-201ENST00000229251 ALG6Q9Y672 507 aa14□□□□□ -0.17
COPS7A-201ENST00000229251 CCDC66A2RUB6 948 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 RRN3P2A6NIE6 340 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 TTLL13PA6NNM8 815 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 TNNC2P02585 160 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 HARSP12081 509 aaKnown RBP13.99□□□□□ -0.17
COPS7A-201ENST00000229251 TNFSF9P41273 254 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 DNA2P51530 1060 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 SMC1AQ14683 1233 aaKnown RBP13.99□□□□□ -0.17
COPS7A-201ENST00000229251 MTHFD1LQ6UB35 978 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 ZBTB33Q86T24 672 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 NUP85Q9BW27 656 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 CDT1Q9H211 546 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 PRDM12Q9H4Q4 367 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 ASB7Q9H672 318 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 MED4Q9NPJ6 270 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 GDF3Q9NR23 364 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 TMEM39AQ9NV64 488 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 DMGDHQ9UI17 866 aaKnown RBP13.99□□□□□ -0.17
COPS7A-201ENST00000229251 LCMT1Q9UIC8 334 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 BDP1A6H8Y1 2624 aa13.99□□□□□ -0.17
COPS7A-201ENST00000229251 GOLGA6L10A0A0M3HER8 536 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 A0A0U1RQG5 324 aaPredicted RBP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 TMEM191BP0C7N4 346 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 SMPD1P17405 629 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 CTNNA2P26232 953 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 GNA15P30679 374 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 NSFP46459 744 aaKnown RBP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 PPFIA1Q13136 1202 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 TRPC3Q13507 836 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 AMHR2Q16671 573 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 APBB1IPQ7Z5R6 666 aaPredicted RBP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 NT5DC4Q86YG4 428 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 RBBP8NLQ8NC74 664 aaPredicted RBP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 OR6J1Q8NGC5 347 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 CAVIN3Q969G5 261 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 TOX2Q96NM4 488 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 ZSWIM1Q9BR11 485 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 PLVAPQ9BX97 442 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 MTMR12Q9C0I1 747 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 RPF1Q9H9Y2 349 aaKnown RBP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 SMARCAL1Q9NZC9 954 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 NUB1Q9Y5A7 615 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 PCDHB4Q9Y5E5 795 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 A6NJR5 290 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 TULP1O00294 542 aaPredicted RBP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 KRIT1O00522 736 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 PQBP1O60828 265 aaKnown RBP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 HEXIM1O94992 359 aaKnown RBP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 LSM8O95777 96 aaKnown RBP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 CTNNA1P35221 906 aaKnown RBP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 SLC1A1P43005 524 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 AARSP49588 968 aaKnown RBP eCLIP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 PAK2Q13177 524 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 GRIK4Q16099 956 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 TMEM132AQ24JP5 1023 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 TMEM270Q6UE05 265 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 MAATS1Q7Z4T9 603 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 RNF180Q86T96 592 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 PHF13Q86YI8 300 aaPredicted RBP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 MCOLN2Q8IZK6 566 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 CCDC26Q8TAB7 109 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 CD101Q93033 1021 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 KRT12Q99456 494 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 PBX4Q9BYU1 374 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 ZNF518BQ9C0D4 1074 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 ACP6Q9NPH0 428 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 CNOT8Q9UFF9 292 aaKnown RBP13.98□□□□□ -0.17
COPS7A-201ENST00000229251 AKT3Q9Y243 479 aa13.98□□□□□ -0.17
COPS7A-201ENST00000229251 ZNF286BP0CG31 522 aa13.97□□□□□ -0.17
COPS7A-201ENST00000229251 RARBP10826 455 aa13.97□□□□□ -0.17
COPS7A-201ENST00000229251 NOMO3P69849 1222 aa13.97□□□□□ -0.17
COPS7A-201ENST00000229251 C1QBPQ07021 282 aaKnown RBP13.97□□□□□ -0.17
COPS7A-201ENST00000229251 CUL1Q13616 776 aa13.97□□□□□ -0.17
COPS7A-201ENST00000229251 AAK1Q2M2I8 961 aa13.97□□□□□ -0.17
COPS7A-201ENST00000229251 LIN9Q5TKA1 542 aa13.97□□□□□ -0.17
COPS7A-201ENST00000229251 SPOPLQ6IQ16 392 aa13.97□□□□□ -0.17
COPS7A-201ENST00000229251 MON1BQ7L1V2 547 aa13.97□□□□□ -0.17
COPS7A-201ENST00000229251 HDAC7Q8WUI4 952 aa13.97□□□□□ -0.17
COPS7A-201ENST00000229251 MINDY3Q9H8M7 445 aa13.97□□□□□ -0.17
COPS7A-201ENST00000229251 VRTNQ9H8Y1 702 aa13.97□□□□□ -0.17
COPS7A-201ENST00000229251 MRPL47Q9HD33 250 aaKnown RBP13.97□□□□□ -0.17
COPS7A-201ENST00000229251 XPNPEP3Q9NQH7 507 aa13.97□□□□□ -0.17
COPS7A-201ENST00000229251 CXXC1Q9P0U4 656 aaPredicted RBP13.97□□□□□ -0.17
COPS7A-201ENST00000229251 ZHX1Q9UKY1 873 aaPredicted RBP13.97□□□□□ -0.17
COPS7A-201ENST00000229251 Q9Y3F1 56 aa13.97□□□□□ -0.17
COPS7A-201ENST00000229251 SCINQ9Y6U3 715 aa13.97□□□□□ -0.17
COPS7A-201ENST00000229251 A0A087WZ62 844 aa13.96□□□□□ -0.17
COPS7A-201ENST00000229251 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms