RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 CDCA3Q99618 268 aaPredicted RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 HSD17B14Q9BPX1 270 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 ADPGKQ9BRR6 497 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 RC3H2Q9HBD1 1191 aaKnown RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 AGPAT5Q9NUQ2 364 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 PRMT7Q9NVM4 692 aaPredicted RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 MAGEC2Q9UBF1 373 aaPredicted RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 KLF15Q9UIH9 416 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 KCNG1Q9UIX4 513 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 DNM3Q9UQ16 869 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 RANBP2P49792 3224 aaKnown RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 MICAL3Q7RTP6 2002 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 J3QW42 95 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 N4BP3O15049 544 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 STX6O43752 255 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 ITGA4P13612 1032 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 ALDH7A1P49419 539 aaKnown RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 NDUFV1P49821 464 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 DRP2Q13474 957 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 PDIA5Q14554 519 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 ZRSR1Q15695 479 aaKnown RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 FXNQ16595 210 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 PLA2G4EQ3MJ16 856 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 TCEAL5Q5H9L2 206 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 NOMO2Q5JPE7 1267 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 ARL6IP4Q66PJ3 421 aaKnown RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 ELMSAN1Q6PJG2 1045 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 RTN4RL1Q86UN2 441 aaPredicted RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 LSRQ86X29 649 aaPredicted RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 TRIM42Q8IWZ5 723 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 KLHL23Q8NBE8 558 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 POF1BQ8WVV4 589 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 TIPINQ9BVW5 301 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 COL25A1Q9BXS0 654 aaPredicted RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 RSAD1Q9HA92 442 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 NGRNQ9NPE2 291 aaKnown RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 TLR9Q9NR96 1032 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 FAM105AQ9NUU6 356 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 CLDND1Q9NY35 253 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 SPG21Q9NZD8 308 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 LZTS1Q9Y250 596 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 ATP8A1Q9Y2Q0 1164 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 ZDHHC9Q9Y397 364 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 ATP6V1DQ9Y5K8 247 aa6.23□□□□□ -1.41
AFP-201ENST00000226359 TRIP12Q14669 1992 aaPredicted RBP6.23□□□□□ -1.41
AFP-201ENST00000226359 DNAH12Q6ZR08 3092 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 H0YCG3 227 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 GRM6O15303 877 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 ZC3H11AO75152 810 aaKnown RBP eCLIP6.22□□□□□ -1.411e-323■□□□□ 8.5
AFP-201ENST00000226359 MED24O75448 989 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 FGF18O76093 207 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 ZSCAN22P10073 491 aaPredicted RBP6.22□□□□□ -1.41
AFP-201ENST00000226359 LIG1P18858 919 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 KCNA5P22460 613 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 SOX18P35713 384 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 NAMPTP43490 491 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 GATMP50440 423 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 EFNA5P52803 228 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 PTENP60484 403 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 PLAURQ03405 335 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 DMP1Q13316 513 aaPredicted RBP6.22□□□□□ -1.41
AFP-201ENST00000226359 MAPK6Q16659 721 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 MAEAQ7L5Y9 396 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 SPRED2Q7Z698 418 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 CATSPER3Q86XQ3 398 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 KSR1Q8IVT5 923 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 PABPC5Q96DU9 382 aaKnown RBP6.22□□□□□ -1.41
AFP-201ENST00000226359 AK8Q96MA6 479 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 CEP89Q96ST8 783 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 POP1Q99575 1024 aaKnown RBP6.22□□□□□ -1.41
AFP-201ENST00000226359 NFKBIZQ9BYH8 718 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 RBSNQ9H1K0 784 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 TLE6Q9H808 572 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 PRDM6Q9NQX0 595 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 DDX19AQ9NUU7 478 aaKnown RBP6.22□□□□□ -1.41
AFP-201ENST00000226359 WRAP73Q9P2S5 460 aaPredicted RBP6.22□□□□□ -1.41
AFP-201ENST00000226359 PLAGL2Q9UPG8 496 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 PCDHB6Q9Y5E3 794 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 PCDHB2Q9Y5E7 798 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 TET1Q8NFU7 2136 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 ZMYM2Q9UBW7 1377 aa6.22□□□□□ -1.41
AFP-201ENST00000226359 FAM221AA4D161 298 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 CSDE1O75534 798 aaKnown RBP6.21□□□□□ -1.41
AFP-201ENST00000226359 MAP3K6O95382 1288 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 EYA4O95677 639 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 ITGB1P05556 798 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 PRKCBP05771 671 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 KRT18P05783 430 aaKnown RBP6.21□□□□□ -1.41
AFP-201ENST00000226359 CYP11B2P19099 503 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 SYT1P21579 422 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 ARL2P36404 184 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 UBA7P41226 1012 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 ATP2C1P98194 919 aaPredicted RBP6.21□□□□□ -1.41
AFP-201ENST00000226359 CAPSQ13938 189 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 GIT2Q14161 759 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 SMC1AQ14683 1233 aaKnown RBP6.21□□□□□ -1.41
AFP-201ENST00000226359 TCEA2Q15560 299 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 DCAF4L1Q3SXM0 396 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 LEXMQ3ZCV2 418 aa6.21□□□□□ -1.41
AFP-201ENST00000226359 PLPP4Q5VZY2 271 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms