RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SMIM28A0A1B0GU29 152 aa20.99■□□□□ 0.95
TNFRSF1A-201ENST00000162749 PRLRP16471 622 aa20.99■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CDH8P55286 799 aa20.99■□□□□ 0.95
TNFRSF1A-201ENST00000162749 YWHAEP62258 255 aaKnown RBP20.99■□□□□ 0.95
TNFRSF1A-201ENST00000162749 TRIM71Q2Q1W2 868 aaKnown RBP20.99■□□□□ 0.95
TNFRSF1A-201ENST00000162749 SMYD5Q6GMV2 418 aa20.99■□□□□ 0.95
TNFRSF1A-201ENST00000162749 RHOT2Q8IXI1 618 aa20.99■□□□□ 0.95
TNFRSF1A-201ENST00000162749 NOA1Q8NC60 698 aaKnown RBP20.99■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CYFIP2Q96F07 1278 aa20.99■□□□□ 0.95
TNFRSF1A-201ENST00000162749 RAB21Q9UL25 225 aa20.99■□□□□ 0.95
TNFRSF1A-201ENST00000162749 ZNF185O15231 689 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 ATMINO43313 823 aaPredicted RBP20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 ATP8B1O43520 1251 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CENPCQ03188 943 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 FBXO47Q5MNV8 452 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 SLFN11Q7Z7L1 901 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 BEST2Q8NFU1 509 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 OSBPL9Q96SU4 736 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CHST12Q9NRB3 414 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 UBQLN1Q9UMX0 589 aaKnown RBP20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 PACSIN2Q9UNF0 486 aaPredicted RBP20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CCDC151A5D8V7 595 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 PPEF2O14830 753 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 P4HA1P13674 534 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 SSTR3P32745 418 aaPredicted RBP20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 TUBB4BP68371 445 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 TCEAL1Q15170 157 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 PASD1Q8IV76 773 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CPA5Q8WXQ8 436 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 PSMB7Q99436 277 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 ZSWIM1Q9BR11 485 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 ARFGAP3Q9NP61 516 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CHORDC1Q9UHD1 332 aaPredicted RBP20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 GTF3C4Q9UKN8 822 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 HYOU1Q9Y4L1 999 aa20.98■□□□□ 0.95
TNFRSF1A-201ENST00000162749 GPR182O15218 404 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 BUB1BO60566 1050 aaPredicted RBP20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 KCNE1P15382 129 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 HADHBP55084 474 aaKnown RBP20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 NOMO3P69849 1222 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 BRD3Q15059 726 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 TRIM72Q6ZMU5 477 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 DAAM2Q86T65 1068 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CAPZA3Q96KX2 299 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 STARD7Q9NQZ5 370 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 FAM105AQ9NUU6 356 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 PADI3Q9ULW8 664 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 GHRP10912 638 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 TCP1P17987 556 aaKnown RBP20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 BRD2P25440 801 aaKnown RBP20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CD52P31358 61 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CXCR5P32302 372 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 MYO1EQ12965 1108 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 NAA35Q5VZE5 725 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 SLC43A3Q8NBI5 491 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 COG1Q8WTW3 980 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 ZNF653Q96CK0 615 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 FUT8Q9BYC5 575 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CYP3A43Q9HB55 503 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CTTNBP2NLQ9P2B4 639 aa20.97■□□□□ 0.95
TNFRSF1A-201ENST00000162749 TDRD15B5MCY1 1934 aaKnown RBP20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 MEIS3P2A8K0S8 358 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CILPO75339 1184 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 RHOXF2BP0C7M4 288 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 LPIN1Q14693 890 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 WHAMMQ8TF30 809 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 TFAP2BQ92481 460 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 MMS19Q96T76 1030 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 RHOXF2Q9BQY4 288 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 BEGAINQ9BUH8 593 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 TRPV6Q9H1D0 765 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 ERVK-5Q9HDB9 667 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 HMGXB4Q9UGU5 601 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CYP1A2P05177 515 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 NSFP46459 744 aaKnown RBP20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 RAD23BP54727 409 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 TNNC1P63316 161 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 FAM26DQ5JW98 314 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 ZNF618Q5T7W0 954 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 C9orf57Q5W0N0 161 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 CREG2Q8IUH2 290 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 MCOLN2Q8IZK6 566 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 SYCE1Q8N0S2 351 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 LRRC52Q8N7C0 313 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 ZFP42Q96MM3 310 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 TWNKQ96RR1 684 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 TSPAN18Q96SJ8 248 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 UNC93B1Q9H1C4 597 aa20.96■□□□□ 0.95
TNFRSF1A-201ENST00000162749 GABPB1Q06547 395 aaPredicted RBP20.95■□□□□ 0.94
TNFRSF1A-201ENST00000162749 SOX4Q06945 474 aaPredicted RBP20.95■□□□□ 0.94
TNFRSF1A-201ENST00000162749 DMTNQ08495 405 aa20.95■□□□□ 0.94
TNFRSF1A-201ENST00000162749 PAK2Q13177 524 aa20.95■□□□□ 0.94
TNFRSF1A-201ENST00000162749 PTPROQ16827 1216 aa20.95■□□□□ 0.94
TNFRSF1A-201ENST00000162749 LONRF2Q1L5Z9 754 aa20.95■□□□□ 0.94
TNFRSF1A-201ENST00000162749 PTGESO14684 152 aa20.94■□□□□ 0.94
TNFRSF1A-201ENST00000162749 MTA2O94776 668 aa20.94■□□□□ 0.94
TNFRSF1A-201ENST00000162749 DNA2P51530 1060 aa20.94■□□□□ 0.94
TNFRSF1A-201ENST00000162749 INCA1Q0VD86 236 aa20.94■□□□□ 0.94
TNFRSF1A-201ENST00000162749 MON1BQ7L1V2 547 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms