RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 SPP2Q13103 211 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 ZNF211Q13398 564 aaPredicted RBP13.13□□□□□ -0.31
LMCD1-201ENST00000157600 TMEM259Q4ZIN3 620 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 SZRD1Q7Z422 152 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 C1orf54Q8WWF1 131 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 A0A0A6YYK5 440 aaPredicted RBP13.13□□□□□ -0.31
LMCD1-201ENST00000157600 ANXA9O76027 345 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 VSNL1P62760 191 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 KCNA1Q09470 495 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 CSTF3Q12996 717 aaKnown RBP13.13□□□□□ -0.31
LMCD1-201ENST00000157600 TAGAPQ8N103 731 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 OSBPL1AQ9BXW6 950 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 RAB6BQ9NRW1 208 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 APPL1Q9UKG1 709 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 ESYT3A0FGR9 886 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 KIF28PB7ZC32 967 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 GSNP06396 782 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 DEFA1P59665 94 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 DEFA3P59666 94 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 GUCY1A3Q02108 690 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 SLC44A5Q8NCS7 719 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 RNF217Q8TC41 542 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 KIF1AQ12756 1690 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 PDHA1P08559 390 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 AARS2Q5JTZ9 985 aaKnown RBP13.13□□□□□ -0.31
LMCD1-201ENST00000157600 COL23A1Q86Y22 540 aaPredicted RBP13.13□□□□□ -0.31
LMCD1-201ENST00000157600 ZNF34Q8IZ26 560 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 RBBP8Q99708 897 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 NDUFS3O75489 264 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 LSM8O95777 96 aaKnown RBP13.13□□□□□ -0.31
LMCD1-201ENST00000157600 CHN1P15882 459 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 MYBPC2Q14324 1141 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 FAM83EQ2M2I3 478 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 HABP4Q5JVS0 413 aaKnown RBP13.13□□□□□ -0.31
LMCD1-201ENST00000157600 ARHGEF1Q92888 912 aaKnown RBP13.13□□□□□ -0.31
LMCD1-201ENST00000157600 EME1Q96AY2 570 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 EPS8L2Q9H6S3 715 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 GJB4Q9NTQ9 266 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 CCDC195A0A1B0GUA6 201 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 NDFIP2Q9NV92 336 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 UTP6Q9NYH9 597 aaKnown RBP13.13□□□□□ -0.31
LMCD1-201ENST00000157600 IL1RAPL1Q9NZN1 696 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 PDGFRAP16234 1089 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 GEMIN4P57678 1058 aaKnown RBP13.13□□□□□ -0.31
LMCD1-201ENST00000157600 PTPN21Q16825 1174 aa13.13□□□□□ -0.31
LMCD1-201ENST00000157600 ZNF473Q8WTR7 871 aaKnown RBP13.13□□□□□ -0.31
LMCD1-201ENST00000157600 MTIF3Q9H2K0 278 aaKnown RBP13.13□□□□□ -0.31
LMCD1-201ENST00000157600 C5orf58C9J3I9 102 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 ACADSP16219 412 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 STX5Q13190 355 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 PDK2Q15119 407 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 TMEM260Q9NX78 707 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 MAP3K13O43283 966 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 GYPCP04921 128 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 TRIM60Q495X7 471 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 PARK7Q99497 189 aaKnown RBP13.12□□□□□ -0.31
LMCD1-201ENST00000157600 SULT1E1P49888 294 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 PTK7Q13308 1070 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 FBXL16Q8N461 479 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 DCDC2Q9UHG0 476 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 CNTNAP5Q8WYK1 1306 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 NCAM2O15394 837 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 EMC2Q15006 297 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 E2F4Q16254 413 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 TFDP3Q5H9I0 405 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 SH3KBP1Q96B97 665 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 MCEEQ96PE7 176 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 SNAPC2Q13487 334 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 BTNL9Q6UXG8 535 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 RIN3Q8TB24 985 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 NCK2O43639 380 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 HBP1O60381 514 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 GH1P01241 217 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 GRIK1P39086 918 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 ANXA11P50995 505 aaKnown RBP13.12□□□□□ -0.31
LMCD1-201ENST00000157600 ZC3H12BQ5HYM0 836 aaKnown RBP13.12□□□□□ -0.31
LMCD1-201ENST00000157600 JAMLQ86YT9 394 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 TC2NQ8N9U0 490 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 GPRASP2Q96D09 838 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 NCOA3Q9Y6Q9 1424 aa13.12□□□□□ -0.31
LMCD1-201ENST00000157600 PSMD7P51665 324 aa13.11□□□□□ -0.31
LMCD1-201ENST00000157600 SEPT1Q8WYJ6 367 aa13.11□□□□□ -0.31
LMCD1-201ENST00000157600 PRPF18Q99633 342 aaKnown RBP13.11□□□□□ -0.31
LMCD1-201ENST00000157600 UBA6A0AVT1 1052 aaPredicted RBP13.11□□□□□ -0.31
LMCD1-201ENST00000157600 CCT8L1PA6NM43 557 aa13.11□□□□□ -0.31
LMCD1-201ENST00000157600 SNTNA6NMZ2 147 aa13.11□□□□□ -0.31
LMCD1-201ENST00000157600 CES2O00748 559 aa13.11□□□□□ -0.31
LMCD1-201ENST00000157600 TIMM44O43615 452 aa13.11□□□□□ -0.31
LMCD1-201ENST00000157600 ADORA2BP29275 332 aa13.11□□□□□ -0.31
LMCD1-201ENST00000157600 SKOR1P84550 965 aa13.11□□□□□ -0.31
LMCD1-201ENST00000157600 NOP9Q86U38 636 aaKnown RBP13.11□□□□□ -0.31
LMCD1-201ENST00000157600 SEC16BQ96JE7 1060 aa13.11□□□□□ -0.31
LMCD1-201ENST00000157600 CDK5RAP1Q96SZ6 601 aaKnown RBP13.11□□□□□ -0.31
LMCD1-201ENST00000157600 DNAJC7Q99615 494 aa13.11□□□□□ -0.31
LMCD1-201ENST00000157600 SPATA16Q9BXB7 569 aa13.11□□□□□ -0.31
LMCD1-201ENST00000157600 PDP2Q9P2J9 529 aa13.11□□□□□ -0.31
LMCD1-201ENST00000157600 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.11□□□□□ -0.31
LMCD1-201ENST00000157600 CNTNAP4Q9C0A0 1308 aa13.11□□□□□ -0.31
LMCD1-201ENST00000157600 O00370 1275 aa13.11□□□□□ -0.31
LMCD1-201ENST00000157600 RGL2O15211 777 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms