RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 ITGA8P53708 1063 aa19.76■□□□□ 0.75
MBD3-201ENST00000156825 ATXN3P54252 364 aaPredicted RBP19.76■□□□□ 0.75
MBD3-201ENST00000156825 NUDT12Q9BQG2 462 aa19.76■□□□□ 0.75
MBD3-201ENST00000156825 MORC2Q9Y6X9 1032 aaPredicted RBP19.76■□□□□ 0.75
MBD3-201ENST00000156825 CUL3Q13618 768 aa19.76■□□□□ 0.75
MBD3-201ENST00000156825 RFWD2Q8NHY2 731 aa19.76■□□□□ 0.75
MBD3-201ENST00000156825 PBXIP1Q96AQ6 731 aa19.76■□□□□ 0.75
MBD3-201ENST00000156825 SEMA6BQ9H3T3 888 aa19.76■□□□□ 0.75
MBD3-201ENST00000156825 ABI2Q9NYB9 513 aaPredicted RBP19.76■□□□□ 0.75
MBD3-201ENST00000156825 LMTK2Q8IWU2 1503 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 KBTBD13C9JR72 458 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 NPTX2P47972 431 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 TTC23LQ6PF05 361 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.75■□□□□ 0.75
MBD3-201ENST00000156825 CD4P01730 458 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 MAGEA9P43362 315 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 BACE1P56817 501 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 USP10Q14694 798 aaKnown RBP19.75■□□□□ 0.75
MBD3-201ENST00000156825 DDX53Q86TM3 631 aaKnown RBP19.75■□□□□ 0.75
MBD3-201ENST00000156825 USP38Q8NB14 1042 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 DAGLBQ8NCG7 672 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 KCNQ5Q9NR82 932 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 ASMTLO95671 621 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 NTRK3Q16288 839 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 FEZF2Q8TBJ5 459 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 GPRASP2Q96D09 838 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 CDH16O75309 829 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 ENO1P06733 434 aaKnown RBP19.75■□□□□ 0.75
MBD3-201ENST00000156825 ITIH2P19823 946 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 RPS12P25398 132 aaKnown RBP19.75■□□□□ 0.75
MBD3-201ENST00000156825 ARHGDIAP52565 204 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 PPP4R4Q6NUP7 873 aa19.75■□□□□ 0.75
MBD3-201ENST00000156825 VCAM1P19320 739 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 MDH1P40925 334 aaKnown RBP19.74■□□□□ 0.75
MBD3-201ENST00000156825 GIT2Q14161 759 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 STILQ15468 1287 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 PKN1Q16512 942 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 PTPRN2Q92932 1015 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 B3GAT3O94766 335 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 VCPP55072 806 aaKnown RBP19.74■□□□□ 0.75
MBD3-201ENST00000156825 TWF1Q12792 350 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 ACOT1Q86TX2 421 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 SPIRE2Q8WWL2 714 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 PLAGL2Q9UPG8 496 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 PIK3C2BO00750 1634 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 ACO1P21399 889 aaKnown RBP19.74■□□□□ 0.75
MBD3-201ENST00000156825 GPD1P21695 349 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 SEC24CP53992 1094 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 PPHLN1Q8NEY8 458 aaKnown RBP19.74■□□□□ 0.75
MBD3-201ENST00000156825 CYFIP2Q96F07 1278 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 CAPN6Q9Y6Q1 641 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 IL18RAPO95256 599 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 CUL2Q13617 745 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 LAMC2Q13753 1193 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 SPATA21Q7Z572 469 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 MUC3BQ9H195 1237 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 TLR2O60603 784 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 THPOP40225 353 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 NOTUMQ6P988 496 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 ASAP3Q8TDY4 903 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 ZIM3Q96PE6 472 aa19.74■□□□□ 0.75
MBD3-201ENST00000156825 MYCBPQ99417 103 aaPredicted RBP19.74■□□□□ 0.75
MBD3-201ENST00000156825 WARS2Q9UGM6 360 aaKnown RBP19.74■□□□□ 0.75
MBD3-201ENST00000156825 TMEM150BA6NC51 233 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 SMIM22K7EJ46 135 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 KCNJ6P48051 423 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 IL17RBQ9NRM6 502 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 LATS2Q9NRM7 1088 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 SETSIPP0DME0 302 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 MAGEA4P43358 317 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 SLC29A2Q14542 456 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 DTX3LQ8TDB6 740 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 TMEM247A6NEH6 219 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 SREBF1P36956 1147 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 CPB2Q96IY4 423 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 LACRTQ9GZZ8 138 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 ING2Q9H160 280 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 A0A1W2PQJ5 194 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 EPHB2P29323 1055 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 TTI2Q6NXR4 508 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 HASPINQ8TF76 798 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 ERP44Q9BS26 406 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 CCDC90BQ9GZT6 254 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 DYRK4Q9NR20 520 aa19.73■□□□□ 0.75
MBD3-201ENST00000156825 AKAP3O75969 853 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 ZNF200P98182 395 aaPredicted RBP19.72■□□□□ 0.75
MBD3-201ENST00000156825 CDC42EP1Q00587 391 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 RABGAP1LQ5R372 815 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 TRAPPC11Q7Z392 1133 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 C20orf96Q9NUD7 363 aaPredicted RBP19.72■□□□□ 0.75
MBD3-201ENST00000156825 STMN1P16949 149 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 SV2CQ496J9 727 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 REXO1L1PQ8IX06 675 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 TPCN2Q8NHX9 752 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 TAS1R2Q8TE23 839 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 ELMO2Q96JJ3 720 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 CCT8L2Q96SF2 557 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 TRIM62Q9BVG3 475 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 KBTBD4Q9NVX7 518 aa19.72■□□□□ 0.75
MBD3-201ENST00000156825 DPP3Q9NY33 737 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms