RNA–Protein interactions for RNA: ENST00000025008.9

RB1CC1-201, Transcript of RB1 inducible coiled-coil 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RB1CC1, Length 6,635 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1-201ENST00000025008 TRPC5OSA6NMA1 111 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 UBOX5O94941 541 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 CRKP46108 304 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 NPEPPSP55786 919 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 KRR1Q13601 381 aaKnown RBP16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 JADE3Q92613 823 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 PTPRN2Q92932 1015 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 GOLPH3Q9H4A6 298 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 ARHGEF38Q9NXL2 777 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 PLEKHG2Q9H7P9 1386 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 SNRNP35Q16560 246 aaKnown RBP16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 CD209Q9NNX6 404 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 BCS1LQ9Y276 419 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 A2ML1A8K2U0 1454 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 LRRC7Q96NW7 1537 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 TPI1P60174 286 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 SNRPFP62306 86 aaKnown RBP16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 EFL1Q7Z2Z2 1120 aaKnown RBP16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 TRIM69Q86WT6 500 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 SPATA18Q8TC71 538 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 APOA4P06727 396 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 PDHBP11177 359 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 PSMC3P17980 439 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 RECQLP46063 649 aaPredicted RBP16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 KCNMA1Q12791 1236 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 WHRNQ9P202 907 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 NUDT2P50583 147 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 OVGP1Q12889 678 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 P3H2Q8IVL5 708 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 ZNF560Q96MR9 790 aa16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 FAM32AQ9Y421 112 aaKnown RBP16.64■□□□□ 0.25
RB1CC1-201ENST00000025008 CST8O60676 142 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 CLPTM1O96005 669 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 YWHABP31946 246 aaKnown RBP16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 WASHC2DQ5SRD0 308 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 SYCP2LQ5T4T6 812 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 LMBRD2Q68DH5 695 aaPredicted RBP16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 ZNF786Q8N393 782 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 FAM111AQ96PZ2 611 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 ZNF556Q9HAH1 456 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 RAVER2Q9HCJ3 691 aaKnown RBP16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 RNF146Q9NTX7 359 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 NFIBO00712 420 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 THRAP10827 490 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 TRIM28Q13263 835 aaKnown RBP16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 NDFIP2Q9NV92 336 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 ADGRA3Q8IWK6 1321 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 VCPP55072 806 aaKnown RBP16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 SYBUQ9NX95 663 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 HERC5Q9UII4 1024 aaKnown RBP16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 CYP27B1O15528 508 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 PLEKP08567 350 aaPredicted RBP16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 MYBP10242 640 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 WDR72Q3MJ13 1102 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 EAPPQ56P03 285 aaPredicted RBP16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 ARHGEF1Q92888 912 aaKnown RBP16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 TNIP3Q96KP6 325 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 PLEKHA5Q9HAU0 1116 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 ZFYVE16Q7Z3T8 1539 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.63■□□□□ 0.253e-6■■□□□ 13.1
RB1CC1-201ENST00000025008 A0A087X0T9 212 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 FAM228BP0C875 321 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 RALAP11233 206 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 SSTR3P32745 418 aaPredicted RBP16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 KCNK10P57789 538 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 TRMT5Q32P41 509 aaKnown RBP16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 MPP6Q9NZW5 540 aa16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 DDX20Q9UHI6 824 aaKnown RBP16.63■□□□□ 0.25
RB1CC1-201ENST00000025008 DGAT1O75907 488 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 TAS2R42Q7RTR8 314 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 LRRC6Q86X45 466 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 TNIP2Q8NFZ5 429 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 CALML6Q8TD86 181 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 EXOSC4Q9NPD3 245 aaKnown RBP16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 PRR23D1E9PI22 279 aaPredicted RBP16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 PRR23D2P0DMB1 279 aaPredicted RBP16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 FDX1P10109 184 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 FXR2P51116 673 aaKnown RBP eCLIP16.62■□□□□ 0.254e-8■□□□□ 10.8
RB1CC1-201ENST00000025008 ZNF235Q14590 738 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 SBK1Q52WX2 424 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 TTC23LQ6PF05 361 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 TUBGCP3Q96CW5 907 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 ELMO2Q96JJ3 720 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 PPP1R2P1Q96PQ5 205 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 MMTAG2Q9BU76 263 aaKnown RBP16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 FRMD8P1Q9BZ68 369 aaPredicted RBP16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 HPSEQ9Y251 543 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 PLA2R1Q13018 1463 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 PSMA4P25789 261 aaKnown RBP16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 KRT33BQ14525 404 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 PTPAQ15257 358 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 SCN4BQ8IWT1 228 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 TMEM8AQ9HCN3 771 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 SHROOM2Q13796 1616 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 PXDNLA1KZ92 1463 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 KIF1BO60333 1816 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 USP1O94782 785 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 PDAP1Q13442 181 aaKnown RBP16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 COBLL1Q53SF7 1204 aa16.62■□□□□ 0.25
RB1CC1-201ENST00000025008 PIK3R5Q8WYR1 880 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms