RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 MAPK6Q16659 721 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 BRDTQ58F21 947 aaPredicted RBP14.84□□□□□ -0.03
USH1C-201ENST00000005226 ZBTB41Q5SVQ8 909 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 TDRD10Q5VZ19 366 aaKnown RBP14.84□□□□□ -0.03
USH1C-201ENST00000005226 LVRNQ6Q4G3 990 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 OTOAQ7RTW8 1153 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 GPD1LQ8N335 351 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 TMC2Q8TDI7 906 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 CNKSR1Q969H4 720 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 GRAMD1AQ96CP6 724 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 NUDCD1Q96RS6 583 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 SMC6Q96SB8 1091 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 UBN1Q9NPG3 1134 aa14.84□□□□□ -0.03
USH1C-201ENST00000005226 DNALI1O14645 258 aaPredicted RBP14.83□□□□□ -0.04
USH1C-201ENST00000005226 ZNF862O60290 1169 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 EDF1O60869 148 aaKnown RBP14.83□□□□□ -0.04
USH1C-201ENST00000005226 PDHA1P08559 390 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 SSTR1P30872 391 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 NLRP11P59045 1033 aaKnown RBP14.83□□□□□ -0.04
USH1C-201ENST00000005226 DYNLT1P63172 113 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 GCNT1Q02742 428 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 HHATQ5VTY9 493 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 CAPRIN2Q6IMN6 1127 aaKnown RBP14.83□□□□□ -0.04
USH1C-201ENST00000005226 RFWD3Q6PCD5 774 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 TAS1R3Q7RTX0 852 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 MTDHQ86UE4 582 aaKnown RBP14.83□□□□□ -0.04
USH1C-201ENST00000005226 NLRX1Q86UT6 975 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 C4orf19Q8IY42 314 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 TMEM174Q8WUU8 243 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 NAF1Q96HR8 494 aaKnown RBP14.83□□□□□ -0.04
USH1C-201ENST00000005226 RAB3IPQ96QF0 476 aaPredicted RBP14.83□□□□□ -0.04
USH1C-201ENST00000005226 LRMDAQ9H2I8 198 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 HERC5Q9UII4 1024 aaKnown RBP14.83□□□□□ -0.04
USH1C-201ENST00000005226 ZBTB12Q9Y330 459 aaPredicted RBP14.83□□□□□ -0.04
USH1C-201ENST00000005226 SMNDC1O75940 238 aaKnown RBP eCLIP14.83□□□□□ -0.04
USH1C-201ENST00000005226 KRT1P04264 644 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 KRT4P19013 534 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 GNAZP19086 355 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 ADRA1DP25100 572 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 PIK3CAP42336 1068 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 YARSP54577 528 aaKnown RBP14.83□□□□□ -0.04
USH1C-201ENST00000005226 RPS6P62753 249 aaKnown RBP14.83□□□□□ -0.04
USH1C-201ENST00000005226 NOMO3P69849 1222 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 KATNAL2Q8IYT4 538 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.83□□□□□ -0.04
USH1C-201ENST00000005226 C10orf82Q8WW14 230 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 FBXL18Q96ME1 805 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 GABBR1Q9UBS5 961 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 FEM1BQ9UK73 627 aa14.83□□□□□ -0.04
USH1C-201ENST00000005226 ENO4A6NNW6 628 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 RAD17O75943 681 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 VNN1O95497 513 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 ICAM1P05362 532 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 GNA15P30679 374 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 PTGER2P43116 358 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 SESN3P58005 492 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 CCDC15Q0P6D6 951 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 WDR44Q5JSH3 913 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 SYCP2LQ5T4T6 812 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 LIN9Q5TKA1 542 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 OGFOD1Q8N543 542 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 BBOF1Q8ND07 529 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 RFWD2Q8NHY2 731 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 ZNF75CPQ92670 426 aaPredicted RBP14.82□□□□□ -0.04
USH1C-201ENST00000005226 ZNF341Q9BYN7 854 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 DENND2DQ9H6A0 471 aaPredicted RBP14.82□□□□□ -0.04
USH1C-201ENST00000005226 RNPEPL1Q9HAU8 725 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 BATF3Q9NR55 127 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 ACTL7BQ9Y614 415 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 ZNF541Q9H0D2 1346 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 MYCNP04198 464 aaPredicted RBP14.82□□□□□ -0.04
USH1C-201ENST00000005226 ACO1P21399 889 aaKnown RBP14.82□□□□□ -0.04
USH1C-201ENST00000005226 CALB2P22676 271 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 PDK4Q16654 411 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 WDR72Q3MJ13 1102 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 ZNF394Q53GI3 561 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.82□□□□□ -0.04
USH1C-201ENST00000005226 FAM160B2Q86V87 743 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 EXD1Q8NHP7 514 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 PRR11Q96HE9 360 aaPredicted RBP14.82□□□□□ -0.04
USH1C-201ENST00000005226 YIPF3Q9GZM5 350 aa14.82□□□□□ -0.04
USH1C-201ENST00000005226 ZNF70Q9UC06 446 aaPredicted RBP14.82□□□□□ -0.04
USH1C-201ENST00000005226 C2orf71A6NGG8 1288 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 MAGEB2O15479 319 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 PSTPIP1O43586 416 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 LYPLA2O95372 231 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 TPBGLP0DKB5 382 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 HARSP12081 509 aaKnown RBP14.81□□□□□ -0.04
USH1C-201ENST00000005226 SKIV2L2P42285 1042 aaKnown RBP14.81□□□□□ -0.04
USH1C-201ENST00000005226 NRLP54845 237 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 GPX6P59796 221 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 OGDHQ02218 1023 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 TFDP1Q14186 410 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 PGM5Q15124 567 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 MSS51Q4VC12 460 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 ANKRD22Q5VYY1 191 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 ABRAQ8N0Z2 381 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 FAM81BQ96LP2 452 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 SLITRK1Q96PX8 696 aa14.81□□□□□ -0.04
USH1C-201ENST00000005226 FNBP1Q96RU3 617 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms