RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Cracr2aQ3UP38 310 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Zscan4fQ3URS2 506 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Icam5Q60625 917 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Wdr44Q6NVE8 915 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 AmphQ7TQF7 686 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Zscan4cQ80VJ6 506 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Trnp1Q80ZI1 223 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Taf2Q8C176 1104 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Zfp446Q8C9M8 523 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Ctu1Q99J10 420 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Fam133bQ9CVI2 245 aaKnown RBP10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Med10Q9CXU0 135 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Snf8Q9CZ28 258 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Adgrf4Q9D2L6 698 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 ParvaQ9EPC1 372 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Rnf4Q9QZS2 194 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Phf2Q9WTU0 1096 aa10.76□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Cdr2lA2A6T1 465 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Gm12394A2AKP6 982 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Ralgapa2A3KGS3 1872 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Apol7bB1AQP7 369 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Tatdn2B7ZNL9 783 aaKnown RBP10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Kng1O08677 661 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Casq2O09161 415 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Atf2P16951 487 aaKnown RBP10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Clcn3P51791 818 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Lhx5P61375 402 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Smyd1P97443 490 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Mrgprb1Q3UG61 350 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Apol7eQ3UZ24 369 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Kctd16Q5DTY9 427 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Vps41Q5KU39 853 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 HarsQ61035 509 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Lrrc24Q8BHA1 521 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Dupd1Q8BK84 215 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Slc38a7Q8BWH0 463 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Ythdf3Q8BYK6 585 aaKnown RBP10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Q8BZE1 841 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Fam118bQ8C569 351 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Sh2d5Q8JZW5 429 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Ube2q2Q8K2Z8 378 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Zcchc18Q8VD24 393 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Ivns1abpQ920Q8 642 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Xpo6Q924Z6 1125 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Pkp2Q9CQ73 795 aaKnown RBP10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Q9CQC3 228 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Rnaseh2aQ9CWY8 301 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Ebag9Q9D0V7 213 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Cul2Q9D4H8 745 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Dusp21Q9D9D8 189 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 AvenQ9D9K3 342 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Rnf138rt1Q9D9M9 248 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Ddx24Q9ESV0 857 aaKnown RBP10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Gtf2ird1Q9JI57 1104 aaKnown RBP10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Trpc3Q9QZC1 836 aa10.75□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Lipo2D3YY49 398 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Chrna1P04756 457 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Krt19P19001 403 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Tnnc2P20801 160 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Kif5cP28738 956 aaKnown RBP10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Nr2c2P49117 596 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 PtpreP49446 699 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Cops2P61202 443 aaKnown RBP10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Pi4k2aQ2TBE6 479 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Pid1Q3UBG2 217 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Q3UE31 404 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Cyp2j11Q3UNV2 504 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 PighQ5M9N4 188 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Inpp4bQ6P1Y8 924 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Uts2bQ765I1 113 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Vat1lQ80TB8 417 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 HomezQ80W88 542 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Tmem120aQ8C1E7 343 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Cfap36Q8C6E0 343 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Syt15Q8C6N3 418 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Btbd9Q8C726 612 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Tmem132cQ8CEF9 1099 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 ItpkaQ8R071 459 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Ccdc137Q8R0K4 290 aaKnown RBP10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Fbxo33Q8VE08 562 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Zkscan3Q91VW9 553 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Pcdha3Q91Y16 942 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Cdk5rap3Q99LM2 503 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Fam212aQ9CX62 282 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Krt71Q9R0H5 524 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Slc22a3Q9WTW5 551 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Col11a1Q61245 1804 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Ccdc152E9PX14 254 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Zfp715G3X9T1 886 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Gm7995L7N2E4 160 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Ces1cP23953 554 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Ercc5P35689 1170 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Cetn1P41209 172 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Adcy8P97490 1249 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Hexim2Q3TVI4 313 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Elf3Q3UPW2 391 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Ttc9Q3V038 219 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Fbxw10Q5SUS0 1030 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Tmem45aQ60774 273 aa10.74□□□□□ -0.69
Cpsf3-211ENSMUST00000222968 Acvrl1Q61288 502 aa10.74□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms