RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 Slx1bQ8BX32 270 aa16.25■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Ttc22Q8C159 568 aa16.25■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 M1apQ9Z0E1 529 aa16.25■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Btbd18A0A0A6YY25 723 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 ProcP33587 460 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Fam160a1Q505K2 1081 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 WhammQ571B6 793 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Adad1Q5SUE7 619 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Mettl25Q6NXH8 597 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Dnajc6Q80TZ3 938 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Ube3cQ80U95 1083 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Enoph1Q8BGB7 257 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Nod1Q8BHB0 953 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Olfml3Q8BK62 406 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Rccd1Q8BTU7 377 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Slc44a2Q8BY89 706 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Ttc8Q8VD72 515 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Tmx2Q9D710 295 aaKnown RBP16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 EtfbQ9DCW4 255 aaKnown RBP16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Tjp2Q9Z0U1 1167 aaKnown RBP16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Prl2c3P04768 224 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 UmpsP13439 481 aaKnown RBP16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Msr1P30204 458 aaKnown RBP16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Raver2Q7TPD6 673 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Skida1Q80YR3 822 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Ddx18Q8K363 660 aaKnown RBP16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Golph3Q9CRA5 298 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 RargP18911 458 aaKnown RBP16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Tmc5Q32NZ6 967 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Ephx4Q6IE26 359 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Rnf139Q7TMV1 668 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Ppme1Q8BVQ5 386 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Syne4Q8CII8 388 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Pcdhgb4Q91XX6 912 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Med24Q99K74 987 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 MydgfQ9CPT4 166 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Gid8Q9D7M1 228 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Mindy4b-psA0A1W2P7H6 457 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 TriqkB2B9E1 86 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Akap1O08715 857 aaKnown RBP16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 PrkceP16054 737 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Plekha7Q3UIL6 1118 aaKnown RBP16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Far2Q7TNT2 515 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Lrfn2Q80TG9 788 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Gtf3c4Q8BMQ2 817 aaKnown RBP16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Josd2Q9CR30 188 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Ube4bQ9ES00 1173 aa16.24■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Scgb2b11A0A087WR49 112 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Ace3D0G895 737 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Alkbh1P0CB42 389 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Erbb2P70424 1256 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Cdca2Q14B71 982 aaKnown RBP16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Arhgef9Q3UTH8 516 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Fbxo39Q5NBU5 443 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 SowahdQ8BY98 327 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 LzicQ8K3C3 190 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Rpap3Q9D706 660 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Psmd12Q9D8W5 456 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Gm7942L7N277 499 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 CcnoP0C242 352 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 CstaP56567 97 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Kpnb1P70168 876 aaKnown RBP16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Thrap3Q569Z6 951 aaKnown RBP16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 BegainQ68EF6 600 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Gm3173A6NAS3 172 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Gm5483B2RV77 97 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Gm3020E9Q3J7 150 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Rap1gds1E9Q912 607 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Gm2897K7N6T7 172 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Akap10O88845 662 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Eps8Q08509 821 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Fam107aQ78TU8 144 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Gm3411Q8C7R2 150 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Eif2b5Q8CHW4 717 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 CerkQ8K4Q7 531 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Dusp19Q8K4T5 220 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Klhl28Q9CR40 571 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Cdc42ep4Q9JM96 349 aaKnown RBP16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Arhgef28P97433 1693 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Spata31E9QAF0 1014 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Bcat1P24288 386 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Ptprn2P80560 1001 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 TdrkhQ80VL1 560 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Kirrel3Q8BR86 778 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 HpdlQ8K248 371 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Tktl2Q9D4D4 627 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 SufuQ9Z0P7 484 aa16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Atp6v0a1Q9Z1G4 839 aaKnown RBP16.23■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Psmb9P28076 219 aa16.22■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Nedd1P33215 660 aa16.22■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Fastkd1Q6DI86 829 aa16.22■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Rbm12b1Q80YR9 836 aaKnown RBP16.22■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Unc5bQ8K1S3 945 aa16.22■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Agap3Q8VHH5 910 aa16.22■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Atp6v1b1Q91YH6 513 aa16.22■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Mmp20P57748 482 aa16.22■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Hacd3Q8K2C9 362 aa16.22■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Appl1Q8K3H0 707 aa16.22■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Scgb2b18A0A087WPA9 112 aa16.22■□□□□ 0.19
Pcdha9-201ENSMUST00000115659 Lzts3A2AHG0 700 aa16.22■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms