RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Pik3caP42337 1068 aa32.54■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Nudt1P53368 156 aa32.54■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Wnt8aQ64527 354 aa32.54■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Pabpc4Q6PHQ9 660 aaKnown RBP32.54■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Lig4Q8BTF7 911 aa32.54■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Kat5Q8CHK4 513 aa32.54■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Rbm12Q8R4X3 992 aaKnown RBP32.54■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Pcyox1Q9CQF9 505 aa32.54■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 GatmQ9D964 423 aaKnown RBP32.54■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Kcnd2Q9Z0V2 630 aa32.54■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Gm28036V9GXJ1 658 aa32.54■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Rap1gapA2ALS5 663 aa32.53■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 P01878 344 aa32.53■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 PrnpP04925 254 aa32.53■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Itgb1P09055 798 aaKnown RBP32.53■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Serpinh1P19324 417 aaKnown RBP32.53■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Myo1fP70248 1099 aa32.53■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 ItgaeQ60677 1167 aa32.53■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Slu7Q8BHJ9 585 aa32.53■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Pcdhb19Q91Y01 801 aa32.53■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Apopt1Q9CQW7 192 aa32.53■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Gtf2h1Q9DBA9 547 aa32.53■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 CenpkQ9ESN5 271 aa32.53■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Grb14Q9JLM9 538 aa32.53■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Gm45261A0A1B0GSP6 197 aa32.52■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Cyp2b9P12790 491 aa32.52■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 YwhahP68510 246 aaKnown RBP32.52■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Cpne7Q0VE82 557 aa32.52■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Dpcr1Q3TNW5 500 aa32.52■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Q3TTJ4 293 aa32.52■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Dnajc16Q80TN4 772 aa32.52■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Usp1Q8BJQ2 784 aa32.52■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 PdhxQ8BKZ9 501 aa32.52■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 EmsyQ8BMB0 1264 aaKnown RBP32.52■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Gm5580A0A0N4SVP8 411 aa32.51■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Man1b1A2AJ15 658 aa32.51■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Oaz2O08608 189 aa32.51■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Tnfrsf18O35714 228 aa32.51■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 RaraP11416 462 aa32.51■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Specc1lQ2KN98 1118 aaKnown RBP32.51■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 CtcfQ61164 736 aaKnown RBP32.51■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Nod1Q8BHB0 953 aa32.51■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Elmo3Q8BYZ7 720 aa32.51■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Gtpbp4Q99ME9 634 aaKnown RBP32.51■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Scyl3Q9DBQ7 735 aa32.51■■■□□ 2.8
Ctdnep1-201ENSMUST00000108593 Gm13212B1ASQ7 799 aa32.51■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Vmn2r111K7N674 857 aa32.51■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Adcy5P84309 1262 aa32.51■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Bbof1Q3V079 533 aa32.51■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Rcan3Q9JKK0 239 aa32.51■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Clec1bQ9JL99 229 aa32.51■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Mmel1Q9JLI3 765 aa32.51■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Irs2P81122 1321 aa32.5■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 YwhaeP62259 255 aaKnown RBP32.5■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Kpna1Q60960 538 aa32.5■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Olfr1105Q7TR58 312 aa32.5■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Dnph1Q80VJ3 173 aa32.5■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Ttyh1Q9D3A9 450 aa32.5■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Dnah12Q3V0Q1 3086 aa32.5■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Olfr1354E9Q5G9 310 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Senp1P59110 640 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Anks1aP59672 1150 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Zkscan4Q5SZT6 480 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Shc3Q61120 474 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Ccpg1Q640L3 753 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Tbc1d12Q6A039 696 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Cfap97Q6ZPR1 541 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Slc38a9Q8BGD6 560 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Brat1Q8C3R1 822 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Spice1Q8C804 860 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 PdxkQ8K183 312 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Ccdc14Q8K2J4 934 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Zdhhc3Q8R173 299 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Slc26a3Q9WVC8 757 aa32.49■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Gm12394A2AKP6 982 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 BhmtO35490 407 aaKnown RBP32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Vti1aO89116 217 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Vamp7P70280 220 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Sh3bp2Q06649 559 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Rapgef1Q3UHC1 1224 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 GmipQ6PGG2 971 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Trit1Q80UN9 467 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Ints4Q8CIM8 964 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 MrgpreQ91ZB7 310 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Afg3l1Q920A7 789 aaKnown RBP32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Mageb16Q9CWV4 363 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Plxna4Q80UG2 1893 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Grm6Q5NCH9 871 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Slc20a1Q61609 681 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Acad11Q80XL6 779 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Noa1Q9JJG9 693 aaKnown RBP32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Pdk2Q9JK42 407 aa32.48■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 ZfxP17012 799 aa32.47■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Lmo2P25801 158 aa32.47■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Fut7Q11131 389 aa32.47■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 H2-Q2Q4KN81 360 aa32.47■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Wdr44Q6NVE8 915 aa32.47■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Tas2r134Q7TQB0 298 aa32.47■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Nipal1Q8BMW7 416 aa32.47■■■□□ 2.79
Ctdnep1-201ENSMUST00000108593 Bicdl2Q8CHW5 507 aa32.47■■■□□ 2.79
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms