RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Sema5bQ60519 1093 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Grid1Q61627 1009 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ugt1a1Q63886 535 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Parp6Q6P6P7 630 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 IqceQ6PCQ0 778 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Tdpoz2Q717B2 364 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Znf579Q80VM4 562 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ugt3a2Q8JZZ0 523 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Zbtb44Q8R0A2 453 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Lrrc8cQ8R502 803 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ino80bQ99PT3 375 aaKnown RBP13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 IydQ9DCX8 285 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Cables1Q9ESJ1 568 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Abcb11Q9QY30 1321 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Gm16430A6X8J1 155 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Clca3bE9PUL3 1044 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 SfnO70456 248 aaKnown RBP13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Lmnb1P14733 588 aaKnown RBP13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Drg1P32233 367 aaKnown RBP13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Wdr18Q4VBE8 431 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Smg5Q6ZPY2 1017 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Stkld1Q80YS9 662 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Kirrel3Q8BR86 778 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ube2q2Q8K2Z8 378 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Wrap53Q8VC51 532 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Trim60Q8VI40 466 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Dtnbp1Q91WZ8 352 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ivns1abpQ920Q8 642 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Nxf1Q99JX7 618 aaKnown RBP13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Emc2Q9CRD2 297 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Thap12Q9CUX1 758 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Slxl1Q9D515 155 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Lrrc34Q9DAM1 415 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Rdh14Q9ERI6 334 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Gucy1a3Q9ERL9 691 aa13.63□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ildr2B5TVM2 661 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ppp1r36D3Z0R2 411 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ttc7bE9Q6P5 843 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Pcdh9F8VPK8 1237 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Rpl21O09167 160 aaKnown RBP13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Rag1P15919 1040 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mcpt4P21812 246 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Cst8P32766 142 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Rab20P35295 233 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Psen1P49769 467 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Pde1bQ01065 535 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Slc24a2Q14BI1 711 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Kmt5aQ2YDW7 349 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Dzip1lQ499E4 774 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 RilpQ5ND29 369 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Pabpn1lQ5XFR0 273 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 HarsQ61035 509 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Tcaf1Q8BNE1 924 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Cpsf7Q8BTV2 471 aaKnown RBP13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Bag2Q91YN9 210 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 HgsQ99LI8 775 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 ParvaQ9EPC1 372 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Slc26a3Q9WVC8 757 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Taf1Q80UV9 1891 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Skint3A7TZF0 458 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Lipo2D3YY49 398 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mroh5E9PUJ8 762 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Hsd17b2P51658 381 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Actr2P61161 394 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 6820408C15RikQ8BJX2 354 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Gpc5Q8CAL5 572 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Stoml1Q8CI66 399 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Slc25a11Q9CR62 314 aaKnown RBP13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Zfp623Q9CY99 499 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 PrccQ9EQC8 491 aaKnown RBP13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Cib2Q9Z309 187 aa13.62□□□□□ -0.23
Nup88-203ENSMUST00000108531 Tspoap1Q7TNF8 1846 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Ccdc170D3YXL0 722 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Slc27a2O35488 620 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 DeptorQ570Y9 409 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Serpinb3dQ6UKZ0 387 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Tdpoz4Q6YCH2 370 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Q80ZQ3 298 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Gtpbp10Q8K013 366 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Cd300ldQ8VCH2 221 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Setd3Q91WC0 594 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Pcdha10Q91Y20 946 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Tmem81Q9D5K1 259 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 PygmQ9WUB3 842 aaKnown RBP13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Gm4846B2RWH8 538 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Capn6O35646 641 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Mnat1P51949 309 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Cdk16Q04735 496 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Lipo3Q3UT41 399 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Prom2Q3UUY6 835 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Gucy2fQ5SDA5 1108 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Cpa1Q7TPZ8 419 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Dhx32Q8BZS9 744 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 CenpuQ8C4M7 410 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Nek8Q91ZR4 698 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 DpysQ9EQF5 519 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 PnkpQ9JLV6 522 aaKnown RBP13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Hao1Q9WU19 370 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Sgk1Q9WVC6 431 aa13.61□□□□□ -0.23
Nup88-203ENSMUST00000108531 Diaph3Q9Z207 1171 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms