RNA–Protein interactions for RNA: ENSMUST00000093490.8

Clcn3-203, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-203ENSMUST00000093490 OafQ8QZR4 282 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Reep2Q8VCD6 254 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Mlc1Q8VHK5 382 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 PolkQ9QUG2 852 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 RecqlQ9Z129 648 aa16.52■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Slc4a9E9PUP3 929 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 FancfE9Q5Z5 343 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Klc2O88448 599 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Ifnar1P33896 590 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Npas2P97460 816 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Hddc2Q3SXD3 199 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Slc16a10Q3U9N9 512 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Tmem109Q3UBX0 243 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Rnpc3Q3UZ01 514 aaKnown RBP16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Tmcc1Q69ZZ6 649 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Wdr91Q7TMQ7 748 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Trim35Q8C006 501 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Mccc1Q99MR8 717 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 AF366264G3X9P9 502 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Slc2a4P14142 509 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Hmgcs2P54869 508 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Tfe3Q64092 572 aaKnown RBP16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Mrgprb8Q7TN51 330 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Btbd7Q8CFE5 1130 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 LactbQ9EP89 551 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Atp11cQ9QZW0 1129 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Got1P05201 413 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 KitP05532 979 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Scg3P47867 471 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Rasip1Q3U0S6 961 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Smcr8Q3UMB5 935 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Slc26a2Q62273 739 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Fbxo10Q7TQF2 950 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Ip6k2Q80V72 448 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Entpd3Q8BFW6 529 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 SpidrQ8BGX7 933 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Slc44a4Q91VA1 707 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 FscbA1EGX6 1074 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Gcnt4E9Q649 455 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Rcn1Q05186 325 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Foxred2Q3USW5 665 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Gm4952Q5FW57 296 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Cdk17Q8K0D0 523 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Cpa5Q8R4H4 436 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Homer3Q99JP6 356 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Chek2Q9Z265 546 aa16.51■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Map7d3A2AEY4 876 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Hnrnph1O35737 449 aaKnown RBP16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Ica1lQ3TY65 431 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Xlr3aQ60595 226 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Tbc1d10bQ8BHL3 798 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 ClmnQ8C5W0 1052 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Bbs7Q8K2G4 715 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Pcdhb11Q91UZ8 797 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Gm28036V9GXJ1 658 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Nccrp1G3X9C2 266 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Pcyt1aP49586 367 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Tspyl5Q69ZB3 406 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Ints2Q80UK8 1198 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Akr1c14Q91WT7 323 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Rgs10Q9CQE5 181 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 ChrngP04760 519 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Orc2Q60862 576 aaKnown RBP16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Stx3Q64704 289 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Chn2Q80XD1 332 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Ddx47Q9CWX9 455 aaKnown RBP16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 PodxlQ9R0M4 503 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Col16a1Q8BLX7 1580 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Serpinb3cA2RSF9 386 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Kcna3P16390 528 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Abce1P61222 599 aaKnown RBP16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Oca2Q62052 833 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Smarca1Q6PGB8 1046 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 P3h2Q8CG71 703 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Scrn1Q9CZC8 414 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Oas1aP11928 367 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 NficP70255 439 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Rplp2P99027 115 aaKnown RBP16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Zfp953Q3UPV7 304 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Oas1gQ8K469 367 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Slf1Q8R3P9 1054 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Nsmce3Q9CPR8 279 aa16.5■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Pik3c2bE9QAN8 1632 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 MtrA6H5Y3 1253 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Lrrc6O88978 473 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Lzts1P60853 599 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Casp4P70343 373 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Oog3Q3UWY1 500 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Stip1Q60864 543 aaKnown RBP16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Skida1Q80YR3 822 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Snx29Q9D3S3 818 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Spag6Q9JLI7 507 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 CtsfQ9R013 462 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Patl2A2ARM1 529 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Gm3424L7N298 263 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Gm8246M0QWX9 263 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 CraddO88843 199 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Tmem120bQ3TA38 339 aa16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Tdrd7Q8K1H1 1086 aaKnown RBP16.49■□□□□ 0.23
Clcn3-203ENSMUST00000093490 Pcdhb21Q91V48 774 aa16.49■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms