RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 G3bp2P97379 482 aaKnown RBP12.21□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Dzip3Q7TPV2 1204 aa12.21□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Znf445Q8R2V3 986 aa12.21□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Rpn1Q91YQ5 608 aaKnown RBP12.21□□□□□ -0.46
Col9a1-202ENSMUST00000088349 1700016D06RikQ9DAA5 166 aa12.21□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Rsrc1Q9DBU6 334 aa12.21□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Clcn2Q9R0A1 908 aa12.21□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Gm9774A0A0A6YVU8 407 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Bfsp1A2AMT1 669 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Gm4846B2RWH8 538 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Prom1O54990 867 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Psmc5P62196 406 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 SbdsP70122 250 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ppm1jQ149T7 507 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 ArsiQ32KI9 573 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ifnl2Q4VK74 193 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Spa17Q62252 149 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Smg5Q6ZPY2 1017 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Rnf139Q7TMV1 668 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Trmt13Q8BYH3 481 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Dtnbp1Q91WZ8 352 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Mfsd5Q921Y4 450 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ptdss1Q99LH2 473 aaKnown RBP12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Usp26Q99MX1 835 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Rab11fip1Q9D620 645 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Pdk2Q9JK42 407 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Pcsk1nQ9QXV0 258 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Iqcj-Schip1A0A088MLT8 559 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 AspgA0JNU3 564 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Prdm12A2AJ77 365 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Pdzrn4E9PUZ9 1014 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Schip1P0DPB4 484 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 SftpbP50405 377 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Vamp7P70280 220 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Slc39a13Q8BZH0 361 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Usp37Q8C0R0 979 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 CenpuQ8C4M7 410 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Tbrg4Q91YM4 630 aaKnown RBP12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Cep72Q9D3R3 646 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Cst12Q9DAN8 128 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Dgcr8Q9EQM6 773 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 XkQ9QXY7 446 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Cetn2Q9R1K9 172 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Anapc7Q9WVM3 565 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Btaf1E9QAE3 1848 aa12.2□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Lrrc63A6H694 637 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Lonrf1D3YY23 762 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Fgf15O35622 218 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Rhox5P52651 210 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Zbtb14Q08376 449 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ece1Q4PZA2 769 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Cyb5d1Q5NCY3 228 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Atl2Q6PA06 583 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Frmd4aQ8BIE6 1020 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ipo5Q8BKC5 1097 aaKnown RBP12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Kdm1bQ8CIG3 826 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Tmem68Q9D850 329 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Rsc1a1Q9ER99 582 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Mocs3A2BDX3 460 aaKnown RBP12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Itga9B8JK39 1036 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Tada2bD3Z4Z0 420 aaKnown RBP12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ift81O35594 676 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Zfp42P22227 288 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Uchl4P58321 233 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 4933427I04RikQ3V053 235 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Gm13103Q4VAD2 491 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Vgll2Q8BGW8 322 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 OlahQ8R197 265 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Foxp3Q99JB6 429 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Tnpo2Q99LG2 887 aaKnown RBP12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Mrps22Q9CXW2 359 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Pias1O88907 651 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 St3gal1P54751 337 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Bace1P56818 501 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Mmp20P57748 482 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Rad54lP70270 747 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Cdk16Q04735 496 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Gpd2Q64521 727 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Arhgef18Q6P9R4 1021 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Dnali1Q8BVN8 258 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Fbxl5Q8C2S5 690 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Wdr60Q8C761 999 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Bco2Q99NF1 532 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Taf1dQ9D4V4 322 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Fem1bQ9Z2G0 627 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Ly75Q60767 1723 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Adamtsl1Q8BLI0 1745 aa12.19□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Rab20P35295 233 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Mfsd14aP70187 490 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Calb2Q08331 271 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Gbp8Q2V6D6 525 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Gm5168Q4KL04 211 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Gm4952Q5FW57 296 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Cdc14aQ6GQT0 603 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 OscarQ8VBT3 265 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Med10Q9CXU0 135 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 NynrinQ5DTZ0 1840 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 TazI7HJS2 263 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 DffaO54786 331 aa12.18□□□□□ -0.46
Col9a1-202ENSMUST00000088349 Tspyl1O88852 379 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 31.9 ms