RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Rtfdc1Q99K95 307 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Gimap3Q99MI6 301 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Mrps5Q99N87 432 aaKnown RBP19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ppp3ccP48455 513 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Etv6P97360 485 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ogfod1Q3U0K8 545 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Chmp2bQ8BJF9 213 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ttc16Q8C1F5 767 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 LactbQ9EP89 551 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Scube2Q9JJS0 997 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Tlr5Q9JLF7 859 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Serpina3kP07759 418 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Atp13a5Q3TYU2 1216 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Olfr670Q7TRP3 312 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Fbxl21Q8BFZ4 434 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 FsbpQ8BKE5 299 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Stau2Q8CJ67 570 aaKnown RBP19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Arfip2Q8K221 341 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ppp1r14cQ8R4S0 164 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Rassf3Q99P51 232 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Rgs10Q9CQE5 181 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Sfmbt1Q9JMD1 863 aa19.25■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Disp2Q8CIP5 1345 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Olfr743L7N1Y2 311 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Kpna1Q60960 538 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 HiraQ61666 1015 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ticam2Q8BJQ4 232 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Inpp5bQ8K337 993 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ascc2Q91WR3 749 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Cnbd2Q9D5U8 673 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Atp11cQ9QZW0 1129 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Abca17E9PX95 1733 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Tdrd5Q5VCS6 1040 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Rassf6Q80UQ2 353 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Kcnv1Q8BZN2 503 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Catsper1Q91ZR5 686 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Thg1lQ9CY52 298 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Slc40a1Q9JHI9 570 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Kcnq2Q9Z351 759 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Rnf10Q3UIW5 804 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Klrg2Q3UM83 387 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 DmgdhQ9DBT9 869 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Slc22a3Q9WTW5 551 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Cyp4a12bA2A974 508 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Rnpc3Q3UZ01 514 aaKnown RBP19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 EregQ61521 162 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Fam214aQ69ZK7 1075 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Fam120bQ6RI63 786 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Baiap2l2Q80Y61 522 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ttc22Q8C159 568 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Hacd3Q8K2C9 362 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ppp6r2Q8R3Q2 923 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Cyp4a12aQ91WL5 508 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Serpina3nQ91WP6 418 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ttc1Q91Z38 292 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Creld2Q9CYA0 350 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 MkksQ9JI70 570 aa19.24■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Gm36028A0A0U1RPM1 299 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Lrch1P62046 709 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 PhexP70669 749 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Pnma2Q8BHK0 365 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Znf445Q8R2V3 986 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Fads3Q9JJE7 449 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Habp4Q9JKS5 411 aaKnown RBP19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ifi206G3UZV2 921 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 KitP05532 979 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Pglyrp2Q8VCS0 530 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Pck1Q9Z2V4 622 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Abca14E9Q8F8 1683 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Gnat1P20612 350 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ap5z1Q3U829 807 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Pacsin1Q61644 441 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Rhpn2Q8BWR8 686 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Scgb2b20Q9JI02 112 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Cyp2d34L7N463 504 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Fgf15O35622 218 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Irf8P23611 424 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Mgat3Q10470 538 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Map3k7Q62073 579 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Chsy1Q6ZQ11 800 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Mical2Q8BML1 960 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Rpn2Q9DBG6 631 aaKnown RBP19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Fbxl16A2RT62 479 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Q3TQQ9 903 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Ino80dQ66JY2 873 aaKnown RBP19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Casc4Q6P2L7 435 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Xpo1Q6P5F9 1071 aaKnown RBP19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Dennd2cQ6P9P8 914 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Elmo2Q8BHL5 732 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Atpaf2Q91YY4 289 aa19.23■□□□□ 0.67
Scaf11-201ENSMUST00000047835 A0A1Y7VP24 259 aa19.22■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Olfr310B2RVZ1 332 aa19.22■□□□□ 0.67
Scaf11-201ENSMUST00000047835 GfapP03995 430 aa19.22■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Lrrc4bP0C192 709 aa19.22■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Satb1Q60611 764 aa19.22■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Olfr212Q7TS33 327 aa19.22■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Dcun1d1Q9QZ73 259 aa19.22■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Stau1Q9Z108 487 aaKnown RBP19.22■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Lcn6A2AJB9 181 aa19.22■□□□□ 0.67
Scaf11-201ENSMUST00000047835 Lta4hP24527 611 aa19.22■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms