RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Tsc1Q9EP53 1161 aa10.89□□□□□ -0.67
Trim17-201ENSMUST00000047697 XkQ9QXY7 446 aa10.89□□□□□ -0.67
Trim17-201ENSMUST00000047697 Fem1bQ9Z2G0 627 aa10.89□□□□□ -0.67
Trim17-201ENSMUST00000047697 Speer3W4VSP1 261 aa10.89□□□□□ -0.67
Trim17-201ENSMUST00000047697 Pds5aQ6A026 1332 aa10.89□□□□□ -0.67
Trim17-201ENSMUST00000047697 Plch1Q4KWH5 1682 aa10.89□□□□□ -0.67
Trim17-201ENSMUST00000047697 Pdzrn4E9PUZ9 1014 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 C130060K24RikG3UWA8 416 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Tekt5G5E8A8 557 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Gm379J3QQ19 296 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Rad54lP70270 747 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Atp11aP98197 1187 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Trim72Q1XH17 477 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Cdc14aQ6GQT0 603 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Rnf139Q7TMV1 668 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 CntrobQ8CB62 887 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Snx30Q8CE50 437 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Setd3Q91WC0 594 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Nme5Q99MH5 211 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Nde1Q9CZA6 344 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Arhgef10lA2AWP8 1280 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Kcna3P16390 528 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Kpnb1P70168 876 aaKnown RBP10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Ccdc127Q3TC33 260 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 D630036H23RikQ3UQD6 204 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Xlr3cQ61806 226 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Nlrp4eQ66X19 978 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Tbc1d22bQ80VE5 505 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Ipo5Q8BKC5 1097 aaKnown RBP10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Slc39a13Q8BZH0 361 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Ccdc159Q8C963 411 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Ago2Q8CJG0 860 aaKnown RBP10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Tgif2lx2Q8K5B9 231 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Vmn1r64Q8R2B8 320 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 DolkQ8R2Y3 534 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Wrap53Q8VC51 532 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Ttc1Q91Z38 292 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Trim66Q924W6 1242 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 PawrQ925B0 333 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Hars2Q99KK9 505 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Polr3cQ9D483 533 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Tmem81Q9D5K1 259 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Psmg1Q9JK23 289 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Rnf25Q9QZR0 456 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Gadd45gQ9Z111 159 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Mtmr7Q9Z2C9 660 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Prdm12A2AJ77 365 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Zc3h7aE9PWW6 970 aaKnown RBP10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Gm3460E9QAI8 215 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Anxa8O35640 327 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Fen1P39749 378 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 AdssP46664 456 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Uchl4P58321 233 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Lzts1P60853 599 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Serping1P97290 504 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 9130409I23RikQ3TS87 320 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Parp6Q6P6P7 630 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Vmn2r26Q6TAC4 855 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Tmco6Q8BQX5 494 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Ddx39aQ8VDW0 427 aaKnown RBP10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Havcr2Q8VIM0 281 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Polr3fQ921X6 316 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Krt7Q9DCV7 457 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Sh2d3cQ9QZS8 854 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Nr1h3Q9Z0Y9 445 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Mettl1Q9Z120 268 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Myh11O08638 1972 aa10.88□□□□□ -0.67
Trim17-201ENSMUST00000047697 Rtl9Q32KG4 1339 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Prss51A0A286YDY8 319 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Vmn2r15L7N2A0 855 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Gtf2bP62915 316 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Epas1P97481 874 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Thumpd3P97770 505 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Ptk6Q64434 451 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Rhbdf2Q80WQ6 827 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Sugp1Q8CH02 643 aaKnown RBP10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Mfsd5Q921Y4 450 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Q9D2Q3 444 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Rnf225Q9D7D1 332 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Mta2Q9R190 668 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Scn4aQ9ER60 1841 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Prdm15E9Q8T2 1174 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Gm4841E9QAA8 417 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Galnt4O08832 578 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Srpk1O70551 648 aaKnown RBP10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Tp53P02340 387 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 CnpP16330 420 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Mmp13P33435 472 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Rps6P62754 249 aaKnown RBP10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Neurog2P70447 263 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Tcf4Q60722 670 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Crybg3Q80W49 1005 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Fbxo38Q8BMI0 1194 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Rfx6Q8C7R7 927 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Stoml1Q8CI66 399 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Rilpl1Q9JJC6 406 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Ltn1Q6A009 1767 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Smchd1Q6P5D8 2007 aaKnown RBP10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Ppp1r36D3Z0R2 411 aa10.87□□□□□ -0.67
Trim17-201ENSMUST00000047697 Gm3415J3QMS8 315 aa10.87□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 70.1 ms