RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Cd97Q9Z0M6 818 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Rtl9Q32KG4 1339 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Gm2237E9Q501 211 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Gm3591K7N6X2 186 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Itgb3O54890 787 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Lrrc4bP0C192 709 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Wnt7aP24383 349 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ddx18Q8K363 660 aaKnown RBP12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Kank3Q9Z1P7 791 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cep85lA0A1W2P884 806 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tmigd3G3X8R9 209 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Olfr743L7N1Y2 311 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Rasgrf2P70392 1189 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 MtbpQ8BJS8 894 aaKnown RBP12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Rcn2Q8BP92 320 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Dennd2aQ8C4S8 1000 aa12.49□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ppargc1aO70343 797 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Msx3P70354 204 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Zfp449Q8CB76 518 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Appl1Q8K3H0 707 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Plcb4Q91UZ1 1175 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ankef1Q9D2J7 775 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Znf609Q8BZ47 1413 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Phka1P18826 1241 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Gpc4P51655 557 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Abi2P62484 446 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Fscn1Q61553 493 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tgoln2Q62314 363 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tdpoz3Q717B4 365 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 NrcamQ810U4 1256 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Q9D2Q3 444 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Sfmbt1Q9JMD1 863 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 EnahQ03173 802 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Adck2Q6NSR3 617 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ftsj1Q8CBC7 324 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cdk17Q8K0D0 523 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Usp26Q99MX1 835 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 LactbQ9EP89 551 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Scgb2b20Q9JI02 112 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Sv2aQ9JIS5 742 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Maged1Q9QYH6 775 aaKnown RBP12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Col18a1P39061 1774 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Thsd7aQ69ZU6 1645 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 PfasQ5SUR0 1337 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Kcnn2P58390 839 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 MagohP61327 146 aaKnown RBP12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cdca2Q14B71 982 aaKnown RBP12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Pan2Q8BGF7 1200 aaKnown RBP12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Mtss1Q8R1S4 759 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 St13Q99L47 371 aaKnown RBP12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 MagohbQ9CQL1 146 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 FignQ9ERZ6 759 aa12.48□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Rhox3cA2AWM0 215 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ttc17E9PVB5 1198 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Morc3F7BJB9 942 aaKnown RBP12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Rhox3hL7MU37 215 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Akap1O08715 857 aaKnown RBP12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 EporP14753 507 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 PpargP37238 505 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Rhox3aQ4TU90 215 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Taf2Q8C176 1104 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cadm1Q8R5M8 456 aaKnown RBP12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Pramef12Q9D2F1 463 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Heatr4E9Q357 955 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Lrrc55Q3UY51 311 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Olfr23Q7TRX4 325 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Apol7cQ8C6E1 369 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Slc8a2Q8K596 921 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Zfp142G5E869 1843 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Plekhg4A0A1L1SU27 1217 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Vmn2r1O70410 912 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cav1P49817 178 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ptcd3Q14C51 685 aaKnown RBP12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Cyp2j11Q3UNV2 504 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Serpinb1cQ5SV42 375 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ptger2Q62053 362 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Atl2Q6PA06 583 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ankrd24Q80VM7 985 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Celf3Q8CIN6 465 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Rpp40Q8R1F9 363 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Trmt11Q9CWH5 460 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Tbx20Q9ES03 445 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Rps6kb2Q9Z1M4 485 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Btbd18A0A0A6YY25 723 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Mup5P11591 180 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Vps4bP46467 444 aaKnown RBP12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 B3gat3P58158 335 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Q3UK37 420 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Q8BGD0 127 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Usp38Q8BW70 1042 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Adprhl2Q8CG72 370 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Mamdc2Q8CG85 686 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Vmn1r214Q8R279 367 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Pcdha10Q91Y20 946 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 TarsQ9D0R2 722 aaKnown RBP12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Vmn2r63E9Q0K5 859 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Gm9268E9Q0M3 861 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Vmn2r62K7N712 859 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Ift81O35594 676 aa12.47□□□□□ -0.41
Pcif1-201ENSMUST00000041643 Col6a1Q04857 1025 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 45.4 ms