RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 TwnkQ8CIW5 685 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Oxnad1Q8VE38 311 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Eif3hQ91WK2 352 aaKnown RBP17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Slc6a16A0A1L1SR47 742 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Serpind1P49182 478 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Slc11a2P49282 568 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Utp14bQ6EJB6 756 aaKnown RBP17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Q6GQU0 248 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Abraxas1Q8BPZ8 407 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Uba3Q8C878 462 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Trip10Q8CJ53 603 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Lrit1Q8K099 624 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 MymkQ9D1N4 221 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Nudt5Q9JKX6 218 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Usp21Q9QZL6 566 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Gcnt4E9Q649 455 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 CblP22682 913 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Igfbp6P47880 238 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Gemin4Q6P6L6 1058 aaKnown RBP17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Mrgprb8Q7TN51 330 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Dnph1Q80VJ3 173 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Lrrc1Q80VQ1 524 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Krt75Q8BGZ7 551 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Pak5Q8C015 719 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Ddx18Q8K363 660 aaKnown RBP17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Pla2g12bQ99P27 195 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Slc25a13Q9QXX4 676 aa17.37■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Naaladl2A0A0N4SUJ3 795 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Celf5D3Z4T1 395 aaKnown RBP17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 1700011I03RikE9PYL8 271 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Fmr1P35922 614 aaKnown RBP17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Serpina5P70458 405 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Rnpc3Q3UZ01 514 aaKnown RBP17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Foxn1Q61575 648 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Mindy1Q76LS9 468 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Stambpl1Q76N33 436 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 LnpkQ7TQ95 425 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Tas2r134Q7TQB0 298 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Alkbh8Q80Y20 664 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Thnsl1Q8BH55 747 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 GanQ8CA72 597 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 OplahQ8K010 1288 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Pcdh10E9PXQ7 1057 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Ctnnal1O88327 731 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Impdh2P24547 514 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 PtpreP49446 699 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 PolgP54099 1218 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Rcn1Q05186 325 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Atp13a4Q5XF90 1193 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Arhgap30Q640N3 1101 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Siglec10Q80ZE3 688 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 AmotQ8VHG2 1126 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Tdrd1Q99MV1 1172 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Fip1l1Q9D824 581 aaKnown RBP17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Dcaf6Q9DC22 876 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 CrotQ9DC50 612 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 4930407I10RikD3Z5T8 1512 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Mdm4O35618 489 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Slc2a4P14142 509 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Ass1P16460 412 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Slc16a1P53986 493 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Rps12P63323 132 aaKnown RBP17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Gm4952Q5FW57 296 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Atp13a3Q5XF89 1219 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Dennd2cQ6P9P8 914 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 SnphQ80U23 495 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Prr33Q8C494 260 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 HnrnprQ8VHM5 632 aaKnown RBP17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Cdc25cP48967 447 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Trim75Q3UWZ0 467 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Usp13Q5BKP2 858 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Myo1dQ5SYD0 1006 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Atg9bQ6EBV9 922 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Papd7Q6PB75 542 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Wdr91Q7TMQ7 748 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 SugctQ7TNE1 436 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Dnajc6Q80TZ3 938 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Lrrc8dQ8BGR2 859 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Washc5Q8C2E7 1159 aaKnown RBP17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Gprc5cQ8K3J9 440 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Arih1Q9Z1K5 555 aa17.36■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Btbd18A0A0A6YY25 723 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 L3mbtl1A2A5N8 826 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 AF366264G3X9P9 502 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Trim43bP86448 445 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 rp9P97762 213 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Xpo1Q6P5F9 1071 aaKnown RBP17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Sarm1Q6PDS3 724 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Dlg1Q811D0 905 aaKnown RBP17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Enoph1Q8BGB7 257 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Gcfc2Q8BKT3 769 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Stk33Q924X7 491 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Snx10Q9CWT3 201 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Q9D9D9 101 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Gm8879F6R3J9 157 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Rhbdl3P58873 404 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Apol7eQ3UZ24 369 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 LrmdaQ9D9B4 229 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Plod1Q9R0E2 728 aa17.35■□□□□ 0.37
Ubfd1-201ENSMUST00000033158 Capn7Q9R1S8 813 aa17.35■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms