RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Mex3cQ05A36 652 aaKnown RBP12.99□□□□□ -0.33
Trim23-201ENSMUST00000022225 Ntrk1Q3UFB7 799 aa12.99□□□□□ -0.33
Trim23-201ENSMUST00000022225 Nt5dc3Q3UHB1 546 aa12.99□□□□□ -0.33
Trim23-201ENSMUST00000022225 Upf3bQ3ULL6 472 aa12.99□□□□□ -0.33
Trim23-201ENSMUST00000022225 Pacs2Q3V3Q7 862 aa12.99□□□□□ -0.33
Trim23-201ENSMUST00000022225 Atp2b4Q6Q477 1205 aa12.99□□□□□ -0.33
Trim23-201ENSMUST00000022225 Kat5Q8CHK4 513 aa12.99□□□□□ -0.33
Trim23-201ENSMUST00000022225 Myl6bQ8CI43 207 aa12.99□□□□□ -0.33
Trim23-201ENSMUST00000022225 Snrnp27Q8K194 155 aa12.99□□□□□ -0.33
Trim23-201ENSMUST00000022225 Tesk2Q8VCT9 570 aa12.99□□□□□ -0.33
Trim23-201ENSMUST00000022225 Q9CPS8 106 aa12.99□□□□□ -0.33
Trim23-201ENSMUST00000022225 Arhgef7Q9ES28 862 aa12.99□□□□□ -0.33
Trim23-201ENSMUST00000022225 Asap1Q9QWY8 1147 aa12.99□□□□□ -0.33
Trim23-201ENSMUST00000022225 VarsQ9Z1Q9 1263 aaKnown RBP12.99□□□□□ -0.33
Trim23-201ENSMUST00000022225 Klhdc7aA2APT9 773 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Sh2d4bA6X942 431 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Apol7bB1AQP7 369 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Mroh8E9PYI4 1049 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 AgxtO35423 414 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Cdh5P55284 784 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Glt6d1Q2NKH9 311 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Nat8lQ3UGX3 299 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Apol7eQ3UZ24 369 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 HlfQ8BW74 295 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Slc5a4bQ91ZP4 660 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 HibadhQ99L13 335 aaKnown RBP12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Isl2Q9CXV0 359 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Thg1lQ9CY52 298 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Drc3Q9D5E4 523 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Crlf3Q9Z2L7 442 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Pck1Q9Z2V4 622 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Btbd35f16A0A087WSN2 498 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Dnmt3aO88508 908 aaKnown RBP12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Pcif1P59114 706 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 RalaP63321 206 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Klrg2Q3UM83 387 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Slfnl1Q8BHW9 410 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Dnali1Q8BVN8 258 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Nlrp4bQ8C6J9 863 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Ccdc92Q8VDN4 314 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Lmcd1Q8VEE1 365 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Ces1fQ91WU0 561 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Ttc5Q99LG4 440 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Pstpip2Q99M15 334 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 NwcQ9CQI4 244 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Fundc1Q9DB70 155 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Rapgef4Q9EQZ6 1011 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 DccP70211 1447 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Tom1O88746 492 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Gsta1P13745 223 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 4930502E18RikQ14BQ3 236 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Tbc1d9bQ5SVR0 1263 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Eif2dQ61211 570 aaKnown RBP12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 WaplQ65Z40 1200 aaKnown RBP12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Gsta1Q6P8Q0 223 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Arhgef18Q6P9R4 1021 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Q8BGA7 448 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Tbc1d17Q8BYH7 645 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Slc35b4Q8CIA5 331 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Slc26a6Q8CIW6 758 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Cdk8Q8R3L8 464 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Snx9Q91VH2 595 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Nsmce3Q9CPR8 279 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 NvlQ9DBY8 855 aaKnown RBP12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Cetn2Q9R1K9 172 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Hdac6Q9Z2V5 1149 aa12.98□□□□□ -0.33
Trim23-201ENSMUST00000022225 Fam205a1D3YZF6 1314 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Adamts6D3Z1A5 1117 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Dusp8O09112 663 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 RxrgP28705 463 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Cd300lgQ1ERP8 331 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Tigd5Q499M4 642 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Esco1Q69Z69 843 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Slain2Q8CI08 581 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Sntg2Q925E0 539 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Ndc80Q9D0F1 642 aaKnown RBP12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Lgr5Q9Z1P4 907 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 4933406M09RikG3XA12 479 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Icam1P13597 537 aaKnown RBP12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Fam117bQ3U3E2 584 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Arhgap30Q640N3 1101 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 E2f7Q6S7F2 904 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Kirrel2Q7TSU7 700 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Tbx10Q810F8 385 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Slc36a3Q811P0 477 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Dupd1Q8BK84 215 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Tmtc3Q8BRH0 920 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Btbd7Q8CFE5 1130 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 TgdsQ8VDR7 355 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Rad18Q9QXK2 509 aaKnown RBP12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 TicrrQ8BQ33 1889 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Mageb4A2A9R3 556 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Ifit3bE9PV48 403 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Mmp13P33435 472 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 VdrP48281 422 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Ppp4r3cQ3V0Y1 813 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 P4ha1Q60715 534 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Dlg4Q62108 724 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Ppp1r12bQ8BG95 976 aa12.97□□□□□ -0.33
Trim23-201ENSMUST00000022225 Trim61Q8JZK6 461 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 60.7 ms