RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Gm4846B2RWH8 538 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Cyp4f40G3UW81 524 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Zfp212G3X8R7 492 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Snx3O70492 162 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Mnat1P51949 309 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Nat8lQ3UGX3 299 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Upf3bQ3ULL6 472 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Vil1Q62468 827 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Nlrp4eQ66X19 978 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Sh3rf1Q69ZI1 892 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Kcnk18Q6VV64 394 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Vmn1r64Q8R2B8 320 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 FibpQ9JI19 357 aa17.35■□□□□ 0.37
Shh-201ENSMUST00000002708 Gm15262A0A140LIQ5 728 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Gm4841E9QAA8 417 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Kcna2P63141 499 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Pgm5Q8BZF8 567 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Psmd6Q99JI4 389 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Hars2Q99KK9 505 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Unc5cO08747 931 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Mmp10O55123 476 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Tff2Q03404 129 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 DeptorQ570Y9 409 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Grm6Q5NCH9 871 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Heatr3Q8BQM4 679 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Serpinb13Q8CDC0 389 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Zfp623Q9CY99 499 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Hsf2bpQ9D4G2 338 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Gucy1a3Q9ERL9 691 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 2210011C24RikA0A087WQ89 206 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 FscbA1EGX6 1074 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 EloblA6PWE0 161 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Stra6O70491 670 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Fgl2P12804 432 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Srebf2Q3U1N2 1130 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Tdpoz4Q6YCH2 370 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Sh2d5Q8JZW5 429 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Nrbp2Q91V36 499 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Pcdha10Q91Y20 946 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Cep83Q9D5R3 692 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 Clcn2Q9R0A1 908 aa17.34■□□□□ 0.37
Shh-201ENSMUST00000002708 AgxtO35423 414 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 L1camP11627 1260 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Kcnn2P58390 839 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Vamp7P70280 220 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Ccdc160Q3UYG1 323 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Vat1lQ80TB8 417 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Cry2Q9R194 592 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Arih1Q9Z1K5 555 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Pds5aQ6A026 1332 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Polr2aP08775 1970 aaKnown RBP17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Sar1aP36536 198 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Nub1P54729 614 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Abi3bpQ59IW6 1179 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Serpinb3dQ6UKZ0 387 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Ddx42Q810A7 929 aaKnown RBP17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Stoml1Q8CI66 399 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Dnajc3Q91YW3 504 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Rev1Q920Q2 1249 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 PnkpQ9JLV6 522 aaKnown RBP17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Scnn1bQ9WU38 638 aa17.33■□□□□ 0.36
Shh-201ENSMUST00000002708 Olfr310B2RVZ1 332 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 TroapB7ZNG4 668 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Lrrc10bG3XA50 292 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Magea1O89006 320 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Magea5O89009 320 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Rbp3P49194 1234 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Rps12P63323 132 aaKnown RBP17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Drp2Q05AA6 957 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Trim72Q1XH17 477 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Trpa1Q8BLA8 1125 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Dhx32Q8BZS9 744 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Ascc2Q91WR3 749 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 IydQ9DCX8 285 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Rsc1a1Q9ER99 582 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Rilpl1Q9JJC6 406 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Magea2Q9R2A2 320 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Zfp612A0A1D5RMC2 672 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Rad54lP70270 747 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Ppp1r13lQ5I1X5 824 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Gbp4Q61107 620 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Mapk15Q80Y86 549 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 B3glctQ8BHT6 489 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Lars2Q8VDC0 902 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 Rnf14Q9JI90 485 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 PorcnQ9JJJ7 461 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 B3galt4Q9Z0F0 371 aa17.32■□□□□ 0.36
Shh-201ENSMUST00000002708 SisF8VQM5 1818 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Magea8O89012 320 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 MafbP54841 323 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Pfkfb2P70265 519 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Adamts18Q4VC17 1219 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 SkiQ60698 725 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Magea3Q6T340 320 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Trmt13Q8BYH3 481 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Rpn1Q91YQ5 608 aaKnown RBP17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 HemgnQ9ERZ0 503 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 UtrnE9Q6R7 3430 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Speer2E9Q9U2 264 aa17.31■□□□□ 0.36
Shh-201ENSMUST00000002708 Rag1P15919 1040 aa17.31■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms