RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	RDI1	Q12434	202 aa		3.16	□□□□□ -1.9
CMR3	YPR013C	YIL177C	P40434	1758 aa		3.15	□□□□□ -1.9
CMR3	YPR013C	YJL225C	P40889	1758 aa		3.15	□□□□□ -1.9
CMR3	YPR013C	SCO1	P23833	295 aa		3.15	□□□□□ -1.91
CMR3	YPR013C	VMA11	P32842	164 aa		3.15	□□□□□ -1.91
CMR3	YPR013C	YKR032W	P36127	104 aa		3.15	□□□□□ -1.91
CMR3	YPR013C	MED6	P38782	295 aa		3.15	□□□□□ -1.91
CMR3	YPR013C	EDC3	P39998	551 aa	Known RBP	3.15	□□□□□ -1.91
CMR3	YPR013C	ICE2	P40499	491 aa		3.15	□□□□□ -1.91
CMR3	YPR013C	SBH2	P52871	88 aa		3.15	□□□□□ -1.91
CMR3	YPR013C	PET20	Q99373	253 aa		3.15	□□□□□ -1.91
CMR3	YPR013C	FKS1	P38631	1876 aa	Known RBP	3.15	□□□□□ -1.91
CMR3	YPR013C	YHR032W-A	P0C5N6	59 aa		3.14	□□□□□ -1.91
CMR3	YPR013C	RPS23A	P0CX29	145 aa	Known RBP	3.14	□□□□□ -1.91
CMR3	YPR013C	RPS23B	P0CX30	145 aa		3.14	□□□□□ -1.91
CMR3	YPR013C	CCA1	P21269	546 aa		3.14	□□□□□ -1.91
CMR3	YPR013C	SRP102	P36057	244 aa	Predicted RBP	3.14	□□□□□ -1.91
CMR3	YPR013C	AIM2	P39721	246 aa		3.14	□□□□□ -1.91
CMR3	YPR013C	SWP1	Q02795	286 aa		3.14	□□□□□ -1.91
CMR3	YPR013C	MAK3	Q03503	176 aa		3.14	□□□□□ -1.91
CMR3	YPR013C	GPI17	Q04080	534 aa		3.14	□□□□□ -1.91
CMR3	YPR013C	TRM12	Q04235	462 aa		3.14	□□□□□ -1.91
CMR3	YPR013C	HNT1	Q04344	158 aa	Known RBP	3.14	□□□□□ -1.91
CMR3	YPR013C	DGA1	Q08650	418 aa		3.14	□□□□□ -1.91
CMR3	YPR013C	MPD1	Q12404	318 aa	Known RBP	3.14	□□□□□ -1.91
CMR3	YPR013C	MHT1	Q12525	324 aa		3.14	□□□□□ -1.91
CMR3	YPR013C	YPR014C	Q6B0W2	109 aa		3.14	□□□□□ -1.91
CMR3	YPR013C	YKL102C	P34249	101 aa		3.13	□□□□□ -1.91
CMR3	YPR013C	SKI6	P46948	246 aa	Predicted RBP	3.13	□□□□□ -1.91
CMR3	YPR013C	PIR5	P46999	287 aa		3.13	□□□□□ -1.91
CMR3	YPR013C	LSM1	P47017	172 aa	Known RBP	3.13	□□□□□ -1.91
CMR3	YPR013C	YJR111C	P47148	283 aa	Known RBP	3.13	□□□□□ -1.91
CMR3	YPR013C	PGA1	P53896	198 aa		3.13	□□□□□ -1.91
CMR3	YPR013C	DYN3	Q04949	312 aa		3.13	□□□□□ -1.91
CMR3	YPR013C	AKR2	Q12013	749 aa		3.13	□□□□□ -1.91
CMR3	YPR013C	TVP38	P36164	337 aa		3.12	□□□□□ -1.91
CMR3	YPR013C	CTR2	P38865	189 aa		3.12	□□□□□ -1.91
CMR3	YPR013C	DSK2	P48510	373 aa		3.12	□□□□□ -1.91
CMR3	YPR013C	COS6	P53344	381 aa		3.12	□□□□□ -1.91
CMR3	YPR013C	TSC3	Q3E790	80 aa		3.12	□□□□□ -1.91
CMR3	YPR013C	MRPS28	P21771	286 aa		3.11	□□□□□ -1.91
CMR3	YPR013C	ACP1	P32463	125 aa		3.11	□□□□□ -1.91
CMR3	YPR013C	FMP23	P38231	175 aa		3.11	□□□□□ -1.91
CMR3	YPR013C	SMD3	P43321	101 aa	Known RBP	3.11	□□□□□ -1.91
CMR3	YPR013C	HSK3	P69852	69 aa		3.11	□□□□□ -1.91
CMR3	YPR013C	TIM9	O74700	87 aa		3.1	□□□□□ -1.91
CMR3	YPR013C	MSW1	P04803	379 aa		3.1	□□□□□ -1.91
CMR3	YPR013C	ATP15	P21306	62 aa		3.1	□□□□□ -1.91
CMR3	YPR013C	TDA4	P47153	279 aa		3.1	□□□□□ -1.91
CMR3	YPR013C	AIF1	P52923	378 aa		3.1	□□□□□ -1.91
CMR3	YPR013C	NQM1	P53228	333 aa	Predicted RBP	3.1	□□□□□ -1.91
CMR3	YPR013C	FEX1	Q08913	375 aa		3.1	□□□□□ -1.91
CMR3	YPR013C	FEX2	Q08991	375 aa		3.1	□□□□□ -1.91
CMR3	YPR013C	RSA4	P25382	515 aa	Known RBP	3.09	□□□□□ -1.91
CMR3	YPR013C	OCH1	P31755	480 aa		3.09	□□□□□ -1.91
CMR3	YPR013C	MRPL17	P36528	281 aa		3.09	□□□□□ -1.91
CMR3	YPR013C	AVT2	P39981	480 aa		3.09	□□□□□ -1.91
CMR3	YPR013C	YER084W	P40057	128 aa		3.09	□□□□□ -1.91
CMR3	YPR013C	SER2	P42941	309 aa		3.09	□□□□□ -1.91
CMR3	YPR013C	YGL088W	P53151	121 aa		3.09	□□□□□ -1.91
CMR3	YPR013C	TMA20	P89886	181 aa	Predicted RBP	3.09	□□□□□ -1.91
CMR3	YPR013C	YDR476C	Q03362	224 aa		3.09	□□□□□ -1.91
CMR3	YPR013C	YPR127W	Q06494	345 aa		3.09	□□□□□ -1.91
CMR3	YPR013C	EFG1	Q3E705	233 aa	Known RBP	3.09	□□□□□ -1.91
CMR3	YPR013C	YCR023C	P25351	611 aa		3.08	□□□□□ -1.92
CMR3	YPR013C	SCM4	P32564	187 aa		3.08	□□□□□ -1.92
CMR3	YPR013C	AGA2	P32781	87 aa		3.08	□□□□□ -1.92
CMR3	YPR013C	FMT1	P32785	401 aa		3.08	□□□□□ -1.92
CMR3	YPR013C	SOK1	P40317	901 aa		3.08	□□□□□ -1.92
CMR3	YPR013C	CAB4	P53332	305 aa		3.08	□□□□□ -1.92
CMR3	YPR013C	MPA43	P53583	542 aa	Predicted RBP	3.08	□□□□□ -1.92
CMR3	YPR013C	YDC1	Q02896	317 aa		3.08	□□□□□ -1.92
CMR3	YPR013C	ARR2	Q06597	130 aa		3.08	□□□□□ -1.92
CMR3	YPR013C	IES4	Q08561	116 aa		3.08	□□□□□ -1.92
CMR3	YPR013C	YOR342C	Q12182	319 aa		3.08	□□□□□ -1.92
CMR3	YPR013C	KRE1	P17260	313 aa		3.07	□□□□□ -1.92
CMR3	YPR013C	BUB2	P26448	306 aa	Predicted RBP	3.07	□□□□□ -1.92
CMR3	YPR013C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
CMR3	YPR013C	YHL026C	P38740	315 aa		3.07	□□□□□ -1.92
CMR3	YPR013C	YEA4	P40004	342 aa		3.07	□□□□□ -1.92
CMR3	YPR013C	RFC2	P40348	353 aa		3.07	□□□□□ -1.92
CMR3	YPR013C	GVP36	P40531	326 aa	Known RBP	3.07	□□□□□ -1.92
CMR3	YPR013C	MNN5	P46982	586 aa		3.07	□□□□□ -1.92
CMR3	YPR013C	GPI14	P47088	403 aa	Known RBP	3.07	□□□□□ -1.92
CMR3	YPR013C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
CMR3	YPR013C	YPR195C	Q06594	109 aa		3.07	□□□□□ -1.92
CMR3	YPR013C	YOL014W	Q08110	124 aa		3.07	□□□□□ -1.92
CMR3	YPR013C	PET54	P10834	293 aa		3.06	□□□□□ -1.92
CMR3	YPR013C	SPO13	P23624	291 aa		3.06	□□□□□ -1.92
CMR3	YPR013C	PGD1	P40356	397 aa		3.06	□□□□□ -1.92
CMR3	YPR013C	PRM10	P42946	383 aa		3.06	□□□□□ -1.92
CMR3	YPR013C	SNX4	P47057	423 aa		3.06	□□□□□ -1.92
CMR3	YPR013C	MOG1	P47123	218 aa		3.06	□□□□□ -1.92
CMR3	YPR013C	YDR274C	P87283	123 aa		3.06	□□□□□ -1.92
CMR3	YPR013C	YML100W-A	Q8TGT0	57 aa		3.06	□□□□□ -1.92
CMR3	YPR013C	PDR18	P53756	1333 aa		3.05	□□□□□ -1.92
CMR3	YPR013C	OPY1	P38271	328 aa		3.05	□□□□□ -1.92
CMR3	YPR013C	NSG1	P38837	291 aa		3.05	□□□□□ -1.92
CMR3	YPR013C	YER134C	P40081	178 aa		3.05	□□□□□ -1.92
CMR3	YPR013C	SPG3	Q04398	127 aa	Predicted RBP	3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 24 ms