RNA–Protein interactions for RNA: YPL246C

RBD2, Transcript of Possible rhomboid protease, yeast

Gene RBD2, Length 789 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RBD2	YPL246C	ELO2	P25358	347 aa		4.85	□□□□□ -1.63
RBD2	YPL246C	YIL169C	P40442	995 aa		4.85	□□□□□ -1.63
RBD2	YPL246C	BNS1	P50084	137 aa		4.85	□□□□□ -1.63
RBD2	YPL246C	OCA1	P50946	238 aa	Predicted RBP	4.85	□□□□□ -1.63
RBD2	YPL246C	SMM1	P53720	384 aa	Known RBP	4.85	□□□□□ -1.63
RBD2	YPL246C	YNR048W	P53740	393 aa		4.85	□□□□□ -1.63
RBD2	YPL246C	YDR415C	Q04033	374 aa	Predicted RBP	4.85	□□□□□ -1.63
RBD2	YPL246C	HOF1	Q05080	669 aa		4.85	□□□□□ -1.63
RBD2	YPL246C	YDR286C	Q05530	114 aa		4.85	□□□□□ -1.63
RBD2	YPL246C	YDL242W	Q07746	117 aa		4.85	□□□□□ -1.63
RBD2	YPL246C	YOR186W	Q08560	144 aa		4.85	□□□□□ -1.63
RBD2	YPL246C	MPD1	Q12404	318 aa	Known RBP	4.85	□□□□□ -1.63
RBD2	YPL246C	YOR192C-C	Q3E736	78 aa		4.85	□□□□□ -1.63
RBD2	YPL246C	YPR108W-A	Q3E7B3	70 aa		4.85	□□□□□ -1.63
RBD2	YPL246C	HUG1	Q6Q5K6	68 aa		4.85	□□□□□ -1.63
RBD2	YPL246C	YMR084W	A2P2R3	262 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	RPS16A	P0CX51	143 aa	Known RBP	4.84	□□□□□ -1.63
RBD2	YPL246C	RPS16B	P0CX52	143 aa	Known RBP	4.84	□□□□□ -1.63
RBD2	YPL246C	CKA1	P15790	372 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	POF1	P25576	258 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	SWD3	P38123	315 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	RIB5	P38145	238 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	ERV15	P38312	142 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	SHG1	P38337	142 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	SLM6	P38343	150 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	RPL13B	P40212	199 aa	Known RBP	4.84	□□□□□ -1.63
RBD2	YPL246C	TIM21	P53220	239 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	FSH2	Q05015	223 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	COQ11	Q05892	277 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	MDM30	Q05930	598 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	IZH3	Q07959	543 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	ZEO1	Q08245	113 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	PRR2	Q12310	699 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	AIM45	Q12480	344 aa	Known RBP	4.84	□□□□□ -1.63
RBD2	YPL246C	RPL13A	Q12690	199 aa	Predicted RBP	4.84	□□□□□ -1.63
RBD2	YPL246C	YBR255C-A	Q3E776	120 aa		4.84	□□□□□ -1.63
RBD2	YPL246C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
RBD2	YPL246C	PDX1	P16451	410 aa		4.83	□□□□□ -1.64
RBD2	YPL246C	YCR101C	P25607	182 aa		4.83	□□□□□ -1.64
RBD2	YPL246C	DEG1	P31115	442 aa	Known RBP	4.83	□□□□□ -1.64
RBD2	YPL246C	DAL3	P32459	195 aa		4.83	□□□□□ -1.64
RBD2	YPL246C	MTC6	P38849	526 aa		4.83	□□□□□ -1.64
RBD2	YPL246C	PAC2	P39937	518 aa		4.83	□□□□□ -1.64
RBD2	YPL246C	GPP2	P40106	250 aa	Known RBP	4.83	□□□□□ -1.64
RBD2	YPL246C	ECO1	P43605	281 aa		4.83	□□□□□ -1.64
RBD2	YPL246C	RPA34	P47006	233 aa	Predicted RBP	4.83	□□□□□ -1.64
RBD2	YPL246C	SLX9	P53251	210 aa	Predicted RBP	4.83	□□□□□ -1.64
RBD2	YPL246C	DIG2	Q03373	323 aa	Known RBP	4.83	□□□□□ -1.64
RBD2	YPL246C	YDR387C	Q04162	555 aa		4.83	□□□□□ -1.64
RBD2	YPL246C	AKR2	Q12013	749 aa		4.83	□□□□□ -1.64
RBD2	YPL246C	CSF1	Q12150	2958 aa		4.83	□□□□□ -1.64
RBD2	YPL246C	RKI1	Q12189	258 aa		4.83	□□□□□ -1.64
RBD2	YPL246C	FRE8	Q12209	686 aa		4.83	□□□□□ -1.64
RBD2	YPL246C	ATG5	Q12380	294 aa		4.83	□□□□□ -1.64
RBD2	YPL246C	SAG1	P20840	650 aa		4.82	□□□□□ -1.64
RBD2	YPL246C	ATG15	P25641	520 aa		4.82	□□□□□ -1.64
RBD2	YPL246C	POP5	P28005	173 aa		4.82	□□□□□ -1.64
RBD2	YPL246C	LAC1	P28496	418 aa		4.82	□□□□□ -1.64
RBD2	YPL246C	AHT1	P29589	182 aa		4.82	□□□□□ -1.64
RBD2	YPL246C	MRPS5	P33759	307 aa		4.82	□□□□□ -1.64
RBD2	YPL246C	RPL14A	P36105	138 aa	Known RBP	4.82	□□□□□ -1.64
RBD2	YPL246C	RPL14B	P38754	138 aa	Known RBP	4.82	□□□□□ -1.64
RBD2	YPL246C	OST1	P41543	476 aa	Known RBP	4.82	□□□□□ -1.64
RBD2	YPL246C	PEF1	P53238	335 aa		4.82	□□□□□ -1.64
RBD2	YPL246C	YLR456W	Q06199	204 aa		4.82	□□□□□ -1.64
RBD2	YPL246C	CTR3	Q06686	241 aa		4.82	□□□□□ -1.64
RBD2	YPL246C	RFU1	Q08003	200 aa		4.82	□□□□□ -1.64
RBD2	YPL246C	YLR118C	Q12354	227 aa		4.82	□□□□□ -1.64
RBD2	YPL246C	IZH2	Q12442	317 aa		4.82	□□□□□ -1.64
RBD2	YPL246C	TOR2	P32600	2474 aa	Known RBP	4.81	□□□□□ -1.64
RBD2	YPL246C	ADH3	P07246	375 aa	Known RBP	4.81	□□□□□ -1.64
RBD2	YPL246C	ERG8	P24521	451 aa		4.81	□□□□□ -1.64
RBD2	YPL246C	ERV1	P27882	189 aa		4.81	□□□□□ -1.64
RBD2	YPL246C	YNK1	P36010	153 aa	Known RBP	4.81	□□□□□ -1.64
RBD2	YPL246C	MIA40	P36046	403 aa		4.81	□□□□□ -1.64
RBD2	YPL246C	ELF1	P36053	145 aa		4.81	□□□□□ -1.64
RBD2	YPL246C	MRPL4	P36517	319 aa		4.81	□□□□□ -1.64
RBD2	YPL246C	YBR292C	P38357	123 aa		4.81	□□□□□ -1.64
RBD2	YPL246C	YER079W	P40052	210 aa	Known RBP	4.81	□□□□□ -1.64
RBD2	YPL246C	PAU15	P40585	124 aa		4.81	□□□□□ -1.64
RBD2	YPL246C	BNA1	P47096	177 aa		4.81	□□□□□ -1.64
RBD2	YPL246C	YGL185C	P53100	379 aa		4.81	□□□□□ -1.64
RBD2	YPL246C	YNR066C	P53752	436 aa		4.81	□□□□□ -1.64
RBD2	YPL246C	FYV6	P53913	173 aa		4.81	□□□□□ -1.64
RBD2	YPL246C	YMR090W	Q04304	227 aa	Known RBP	4.81	□□□□□ -1.64
RBD2	YPL246C	SEN15	Q04675	128 aa		4.81	□□□□□ -1.64
RBD2	YPL246C	MSI1	P13712	422 aa		4.8	□□□□□ -1.64
RBD2	YPL246C	DAL82	P21705	255 aa		4.8	□□□□□ -1.64
RBD2	YPL246C	SPO13	P23624	291 aa		4.8	□□□□□ -1.64
RBD2	YPL246C	CDC50	P25656	391 aa		4.8	□□□□□ -1.64
RBD2	YPL246C	IMP1	P28627	190 aa		4.8	□□□□□ -1.64
RBD2	YPL246C	MCH2	P36032	473 aa		4.8	□□□□□ -1.64
RBD2	YPL246C	CDS1	P38221	457 aa		4.8	□□□□□ -1.64
RBD2	YPL246C	YBR096W	P38256	230 aa		4.8	□□□□□ -1.64
RBD2	YPL246C	RTC3	P38804	111 aa	Predicted RBP	4.8	□□□□□ -1.64
RBD2	YPL246C	CCS1	P40202	249 aa	Known RBP	4.8	□□□□□ -1.64
RBD2	YPL246C	FLX1	P40464	311 aa		4.8	□□□□□ -1.64
RBD2	YPL246C	PHS1	P40857	217 aa		4.8	□□□□□ -1.64
RBD2	YPL246C	HXT14	P42833	540 aa		4.8	□□□□□ -1.64
RBD2	YPL246C	YGL262W	P53054	175 aa		4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms