RNA–Protein interactions for RNA: YNL081C

SWS2, Transcript of Putative mitochondrial ribosomal protein of the small subunit, yeast

Gene SWS2, Length 432 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWS2	YNL081C	KSS1	P14681	368 aa		0.91	□□□□□ -2.26
SWS2	YNL081C	STE18	P18852	110 aa		0.91	□□□□□ -2.26
SWS2	YNL081C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.91	□□□□□ -2.26	not detected
SWS2	YNL081C	TCA17	P32613	152 aa		0.91	□□□□□ -2.26
SWS2	YNL081C	EDC3	P39998	551 aa	Known RBP	0.91	□□□□□ -2.26
SWS2	YNL081C	YNL194C	P40169	301 aa		0.91	□□□□□ -2.26
SWS2	YNL081C	RAD17	P48581	401 aa		0.91	□□□□□ -2.26
SWS2	YNL081C	MGA1	P53050	456 aa		0.91	□□□□□ -2.26
SWS2	YNL081C	PDR17	P53844	350 aa		0.91	□□□□□ -2.26
SWS2	YNL081C	PGA2	P53903	129 aa		0.91	□□□□□ -2.26
SWS2	YNL081C	CWC21	Q03375	135 aa	Known RBP	0.91	□□□□□ -2.26
SWS2	YNL081C	CDC36	P06100	191 aa	Predicted RBP	0.9	□□□□□ -2.27
SWS2	YNL081C	COQ1	P18900	473 aa		0.9	□□□□□ -2.27
SWS2	YNL081C	BET1	P22804	142 aa		0.9	□□□□□ -2.27
SWS2	YNL081C	MGM101	P32787	269 aa	Known RBP	0.9	□□□□□ -2.27
SWS2	YNL081C	SIP3	P38717	1229 aa		0.9	□□□□□ -2.27
SWS2	YNL081C	YRB1	P41920	201 aa	Known RBP	0.9	□□□□□ -2.27
SWS2	YNL081C	IRC18	P47056	224 aa		0.9	□□□□□ -2.27
SWS2	YNL081C	RPL37B	P51402	88 aa	Known RBP	0.9	□□□□□ -2.27
SWS2	YNL081C	YDR274C	P87283	123 aa		0.9	□□□□□ -2.27
SWS2	YNL081C	MRPS17	Q03246	237 aa	Predicted RBP	0.9	□□□□□ -2.27
SWS2	YNL081C	TLG1	Q03322	224 aa		0.9	□□□□□ -2.27
SWS2	YNL081C	RCE1	Q03530	315 aa		0.9	□□□□□ -2.27
SWS2	YNL081C	YHR007C-A	Q07074	71 aa		0.9	□□□□□ -2.27
SWS2	YNL081C	YFR032C-B	Q8TGU2	87 aa		0.9	□□□□□ -2.27
SWS2	YNL081C	YDR157W	A0A023PZE8	133 aa		0.89	□□□□□ -2.27
SWS2	YNL081C	CDC33	P07260	213 aa	Known RBP	0.89	□□□□□ -2.27
SWS2	YNL081C	PRP18	P33411	251 aa	Predicted RBP	0.89	□□□□□ -2.27
SWS2	YNL081C	PRX1	P34227	261 aa	Known RBP	0.89	□□□□□ -2.27
SWS2	YNL081C	TAF14	P35189	244 aa		0.89	□□□□□ -2.27
SWS2	YNL081C	OPY1	P38271	328 aa		0.89	□□□□□ -2.27
SWS2	YNL081C	YBR285W	P38354	144 aa		0.89	□□□□□ -2.27
SWS2	YNL081C	SOK1	P40317	901 aa		0.89	□□□□□ -2.27
SWS2	YNL081C	CWC23	P52868	283 aa	Predicted RBP	0.89	□□□□□ -2.27
SWS2	YNL081C	YGR050C	P53231	118 aa		0.89	□□□□□ -2.27
SWS2	YNL081C	YDR249C	Q03787	373 aa		0.89	□□□□□ -2.27
SWS2	YNL081C	CUE4	Q04201	117 aa	Predicted RBP	0.89	□□□□□ -2.27
SWS2	YNL081C	MDM32	Q12171	622 aa		0.89	□□□□□ -2.27
SWS2	YNL081C	NCB2	Q92317	146 aa		0.89	□□□□□ -2.27
SWS2	YNL081C	YIL177C	P40434	1758 aa		0.88	□□□□□ -2.27
SWS2	YNL081C	YJL225C	P40889	1758 aa		0.88	□□□□□ -2.27
SWS2	YNL081C	YLR236C	A0A023PZG4	107 aa		0.88	□□□□□ -2.27
SWS2	YNL081C	RPL25	P04456	142 aa	Known RBP	0.88	□□□□□ -2.27
SWS2	YNL081C	RPB3	P16370	318 aa	Known RBP	0.88	□□□□□ -2.27
SWS2	YNL081C	ASF2	P32448	525 aa	Predicted RBP	0.88	□□□□□ -2.27
SWS2	YNL081C	TRM5	P38793	499 aa		0.88	□□□□□ -2.27
SWS2	YNL081C	FLX1	P40464	311 aa		0.88	□□□□□ -2.27
SWS2	YNL081C	ARO8	P53090	500 aa	Known RBP	0.88	□□□□□ -2.27
SWS2	YNL081C	PET191	Q02772	108 aa		0.88	□□□□□ -2.27
SWS2	YNL081C	ATG38	Q05789	226 aa	Known RBP	0.88	□□□□□ -2.27
SWS2	YNL081C	QCR6	P00127	147 aa		0.87	□□□□□ -2.27
SWS2	YNL081C	SIR2	P06700	562 aa		0.87	□□□□□ -2.27
SWS2	YNL081C	SEC4	P07560	215 aa	Known RBP	0.87	□□□□□ -2.27
SWS2	YNL081C	NSP1	P14907	823 aa	Known RBP	0.87	□□□□□ -2.27
SWS2	YNL081C	MER1	P16523	270 aa		0.87	□□□□□ -2.27
SWS2	YNL081C	YPK2	P18961	677 aa		0.87	□□□□□ -2.27
SWS2	YNL081C	CKS1	P20486	150 aa	Known RBP	0.87	□□□□□ -2.27
SWS2	YNL081C	APA2	P22108	325 aa		0.87	□□□□□ -2.27
SWS2	YNL081C	ADE1	P27616	306 aa		0.87	□□□□□ -2.27
SWS2	YNL081C	SPS18	P32572	300 aa		0.87	□□□□□ -2.27
SWS2	YNL081C	HUA1	P40325	198 aa		0.87	□□□□□ -2.27
SWS2	YNL081C	LSM7	P53905	115 aa	Known RBP	0.87	□□□□□ -2.27
SWS2	YNL081C	COG5	P53951	403 aa		0.87	□□□□□ -2.27
SWS2	YNL081C	YOL160W	Q08321	113 aa		0.87	□□□□□ -2.27
SWS2	YNL081C	RAD28	Q12021	506 aa		0.87	□□□□□ -2.27
SWS2	YNL081C	GET4	Q12125	312 aa		0.87	□□□□□ -2.27
SWS2	YNL081C	YCL012C	Q8J0M4	134 aa		0.87	□□□□□ -2.27
SWS2	YNL081C	SAC3	P46674	1301 aa		0.87	□□□□□ -2.27
SWS2	YNL081C	SEC11	P15367	167 aa		0.86	□□□□□ -2.27
SWS2	YNL081C	ATP15	P21306	62 aa		0.86	□□□□□ -2.27
SWS2	YNL081C	MAG1	P22134	296 aa	Known RBP	0.86	□□□□□ -2.27
SWS2	YNL081C	RFA3	P26755	122 aa	Known RBP	0.86	□□□□□ -2.27
SWS2	YNL081C	YHL042W	P38729	150 aa		0.86	□□□□□ -2.27
SWS2	YNL081C	RFC4	P40339	323 aa	Known RBP	0.86	□□□□□ -2.27
SWS2	YNL081C	YAE1	P47118	141 aa	Predicted RBP	0.86	□□□□□ -2.27
SWS2	YNL081C	CGR1	P53188	120 aa		0.86	□□□□□ -2.27
SWS2	YNL081C	NOP19	P53317	196 aa	Predicted RBP	0.86	□□□□□ -2.27
SWS2	YNL081C	GIM3	P53900	129 aa		0.86	□□□□□ -2.27
SWS2	YNL081C	BNA7	Q04066	261 aa		0.86	□□□□□ -2.27
SWS2	YNL081C	ABP140	Q08641	628 aa	Known RBP	0.86	□□□□□ -2.27
SWS2	YNL081C	ACC1	Q00955	2233 aa	Known RBP	0.86	□□□□□ -2.27
SWS2	YNL081C	QCR7	P00128	127 aa		0.85	□□□□□ -2.27
SWS2	YNL081C	RPL27A	P0C2H6	136 aa	Known RBP	0.85	□□□□□ -2.27
SWS2	YNL081C	AQY2	P0CD90	149 aa		0.85	□□□□□ -2.27
SWS2	YNL081C	MATALPHA2	P0CY08	210 aa		0.85	□□□□□ -2.27
SWS2	YNL081C	HMLALPHA2	P0CY09	210 aa		0.85	□□□□□ -2.27
SWS2	YNL081C	IKI1	P38874	309 aa		0.85	□□□□□ -2.27
SWS2	YNL081C	TVP23	P38962	199 aa		0.85	□□□□□ -2.27
SWS2	YNL081C	HMF1	P40037	129 aa	Known RBP	0.85	□□□□□ -2.27
SWS2	YNL081C	AIM25	P47140	327 aa		0.85	□□□□□ -2.27
SWS2	YNL081C	CWC27	Q02770	301 aa		0.85	□□□□□ -2.27
SWS2	YNL081C	YMR226C	Q05016	267 aa	Known RBP	0.85	□□□□□ -2.27
SWS2	YNL081C	HTB1	P02293	131 aa	Known RBP	0.84	□□□□□ -2.27
SWS2	YNL081C	HTB2	P02294	131 aa		0.84	□□□□□ -2.27
SWS2	YNL081C	CBF1	P17106	351 aa		0.84	□□□□□ -2.27
SWS2	YNL081C	ECM4	P36156	370 aa		0.84	□□□□□ -2.27
SWS2	YNL081C	YCR087C-A	P37263	153 aa		0.84	□□□□□ -2.27
SWS2	YNL081C	VMA22	P38784	181 aa		0.84	□□□□□ -2.27
SWS2	YNL081C	YER034W	P40022	185 aa	Known RBP	0.84	□□□□□ -2.27
SWS2	YNL081C	ERG10	P41338	398 aa	Known RBP	0.84	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms