RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	YHR214C-E	Q8TGK0	99 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	YOR032W-A	Q8TGS1	66 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	ODC2	Q99297	307 aa		2.95	□□□□□ -1.94
TPM1	YNL079C	TOR2	P32600	2474 aa	Known RBP	2.95	□□□□□ -1.94
TPM1	YNL079C	PIS1	P06197	220 aa	Known RBP	2.94	□□□□□ -1.94
TPM1	YNL079C	SGA1	P08019	549 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	PUT1	P09368	476 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	DSF1	P0CX08	502 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	YNR073C	P0CX09	502 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	SEN2	P16658	377 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	YCR016W	P25617	290 aa	Known RBP	2.94	□□□□□ -1.94
TPM1	YNL079C	MRP17	P28778	131 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	ARO4	P32449	370 aa	Known RBP	2.94	□□□□□ -1.94
TPM1	YNL079C	TOA2	P32774	122 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	MRPL27	P36526	146 aa	Predicted RBP	2.94	□□□□□ -1.94
TPM1	YNL079C	GEP4	P38812	185 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	PTI1	P39927	425 aa	Predicted RBP	2.94	□□□□□ -1.94
TPM1	YNL079C	SWM2	P40342	146 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	ERJ5	P43613	295 aa	Predicted RBP	2.94	□□□□□ -1.94
TPM1	YNL079C	CIN2	P46670	268 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	LOH1	P47055	219 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	JAC1	P53193	184 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	RSM27	P53305	110 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	NRK1	P53915	240 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	RNH201	P53942	307 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	not detected
TPM1	YNL079C	PRM15	Q03262	622 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	SDC1	Q03323	175 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	YDR102C	Q03864	110 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	MIX14	Q04341	121 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	HNT1	Q04344	158 aa	Known RBP	2.94	□□□□□ -1.94
TPM1	YNL079C	JID1	Q12350	301 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	YOP1	Q12402	180 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	EAF3	Q12432	401 aa		2.94	□□□□□ -1.94
TPM1	YNL079C	YFR010W-A	P0C5N0	62 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	MDH2	P22133	377 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	MAG1	P22134	296 aa	Known RBP	2.93	□□□□□ -1.94
TPM1	YNL079C	SUA5	P32579	426 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	FMT1	P32785	401 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	PAN3	P36102	679 aa	Predicted RBP	2.93	□□□□□ -1.94
TPM1	YNL079C	UMP1	P38293	148 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	OM14	P38325	134 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	HAC1	P41546	238 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	ECO1	P43605	281 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	YFR057W	P43625	151 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	MST27	P53176	234 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	PDR16	P53860	351 aa	Known RBP	2.93	□□□□□ -1.94
TPM1	YNL079C	DID2	P69771	204 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	ADD37	Q03233	198 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	DIG2	Q03373	323 aa	Known RBP	2.93	□□□□□ -1.94
TPM1	YNL079C	SYM1	Q06563	197 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	FEX1	Q08913	375 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	MCT1	Q12283	360 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	PRM4	Q12498	284 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	YGL194C-A	Q2V2P6	80 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	YCR024C-B	Q3E7Z8	88 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	PET20	Q99373	253 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	POL2	P21951	2222 aa	Known RBP	2.93	□□□□□ -1.94
TPM1	YNL079C	CYR1	P08678	2026 aa	Known RBP	2.93	□□□□□ -1.94
TPM1	YNL079C	FLO9	P39712	1322 aa		2.93	□□□□□ -1.94
TPM1	YNL079C	CDC36	P06100	191 aa	Predicted RBP	2.92	□□□□□ -1.94
TPM1	YNL079C	PCL1	P24867	279 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	RFA3	P26755	122 aa	Known RBP	2.92	□□□□□ -1.94
TPM1	YNL079C	VMA5	P31412	392 aa	Known RBP	2.92	□□□□□ -1.94
TPM1	YNL079C	YBL010C	P32788	280 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	YBR096W	P38256	230 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	YPC1	P38298	316 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	WSS1	P38838	269 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	YMR144W	P40214	342 aa	Known RBP	2.92	□□□□□ -1.94
TPM1	YNL079C	BMT5	P40493	336 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	BNS1	P50084	137 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	UBC12	P52491	188 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	YGL159W	P53110	370 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	OKP1	P53298	406 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	YDR209C	Q03480	137 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	YML018C	Q03730	393 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	YML108W	Q03759	105 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	YFH1	Q07540	174 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	LDS2	Q08218	356 aa		2.92	□□□□□ -1.94
TPM1	YNL079C	TFB5	Q3E7C1	72 aa	Predicted RBP	2.92	□□□□□ -1.94
TPM1	YNL079C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.91	□□□□□ -1.94	not detected
TPM1	YNL079C	COX5B	P00425	151 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	RPS16A	P0CX51	143 aa	Known RBP	2.91	□□□□□ -1.94
TPM1	YNL079C	RPS16B	P0CX52	143 aa	Known RBP	2.91	□□□□□ -1.94
TPM1	YNL079C	RPL30	P14120	105 aa	Known RBP	2.91	□□□□□ -1.94
TPM1	YNL079C	SEC22	P22214	214 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	IFM1	P25038	676 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	TRR1	P29509	319 aa	Known RBP	2.91	□□□□□ -1.94
TPM1	YNL079C	VAM7	P32912	316 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	TIR2	P33890	251 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	POP8	P38208	133 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.91	□□□□□ -1.94	RIP-Chip
TPM1	YNL079C	MIG3	P39943	394 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	EGT2	P42835	1041 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	MOB2	P43563	287 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	TAD2	P47058	250 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	YJL016W	P47072	561 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	ADO1	P47143	340 aa	Known RBP	2.91	□□□□□ -1.94
TPM1	YNL079C	ABM1	P47146	123 aa		2.91	□□□□□ -1.94
TPM1	YNL079C	NIF3	P53081	288 aa		2.91	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms