RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W MAL12P53341 584 aa2.7□□□□□ -1.98
CSM3YMR048W PAU12P53343 120 aa2.7□□□□□ -1.98
CSM3YMR048W YNR062CP53748 327 aa2.7□□□□□ -1.98
CSM3YMR048W OST6Q03723 332 aa2.7□□□□□ -1.98
CSM3YMR048W BNA7Q04066 261 aa2.7□□□□□ -1.98
CSM3YMR048W COX20Q04935 205 aa2.7□□□□□ -1.98
CSM3YMR048W NNT1Q05874 261 aa2.7□□□□□ -1.98
CSM3YMR048W MIM1Q08176 113 aa2.7□□□□□ -1.98
CSM3YMR048W SYC1Q08553 188 aaPredicted RBP2.7□□□□□ -1.98
CSM3YMR048W MDM32Q12171 622 aa2.7□□□□□ -1.98
CSM3YMR048W YLR126CQ12288 251 aa2.7□□□□□ -1.98
CSM3YMR048W YOL085CQ99345 113 aa2.7□□□□□ -1.98
CSM3YMR048W SCO1P23833 295 aa2.69□□□□□ -1.98
CSM3YMR048W RPL16BP26785 198 aaKnown RBP2.69□□□□□ -1.98
CSM3YMR048W MDH3P32419 343 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98not detected
CSM3YMR048W KRE6P32486 720 aa2.69□□□□□ -1.98
CSM3YMR048W ZRT3P34240 503 aa2.69□□□□□ -1.98
CSM3YMR048W FCY21P40039 528 aa2.69□□□□□ -1.98
CSM3YMR048W GDS1P41913 522 aa2.69□□□□□ -1.98
CSM3YMR048W YGL204CP53089 101 aa2.69□□□□□ -1.98
CSM3YMR048W SDS23P53172 527 aa2.69□□□□□ -1.98
CSM3YMR048W OKP1P53298 406 aa2.69□□□□□ -1.98
CSM3YMR048W MPA43P53583 542 aaPredicted RBP2.69□□□□□ -1.98
CSM3YMR048W PGA1P53896 198 aa2.69□□□□□ -1.98
CSM3YMR048W NRK1P53915 240 aa2.69□□□□□ -1.98
CSM3YMR048W YMR099CQ03161 297 aaKnown RBP2.69□□□□□ -1.98
CSM3YMR048W MIX14Q04341 121 aa2.69□□□□□ -1.98
CSM3YMR048W SEI1Q06058 285 aa2.69□□□□□ -1.98
CSM3YMR048W RRG8Q06109 277 aa2.69□□□□□ -1.98
CSM3YMR048W PEX30Q06169 523 aa2.69□□□□□ -1.98
CSM3YMR048W YLR173WQ06247 608 aa2.69□□□□□ -1.98
CSM3YMR048W USB1Q12208 290 aaKnown RBP2.69□□□□□ -1.98
CSM3YMR048W YDL180WQ12301 547 aa2.69□□□□□ -1.98
CSM3YMR048W YOR343CQ12484 108 aa2.69□□□□□ -1.98
CSM3YMR048W SUS1Q6WNK7 96 aa2.69□□□□□ -1.98
CSM3YMR048W Q0144Q9ZZW2 109 aa2.69□□□□□ -1.98
CSM3YMR048W RPC40P07703 335 aaKnown RBP2.68□□□□□ -1.98
CSM3YMR048W MATALPHA1P0CY06 175 aa2.68□□□□□ -1.98
CSM3YMR048W HMLALPHA1P0CY07 175 aa2.68□□□□□ -1.98
CSM3YMR048W FUS3P16892 353 aaKnown RBP2.68□□□□□ -1.98
CSM3YMR048W RFA3P26755 122 aaKnown RBP2.68□□□□□ -1.98
CSM3YMR048W HYM1P32464 399 aa2.68□□□□□ -1.98
CSM3YMR048W HSP150P32478 413 aa2.68□□□□□ -1.98
CSM3YMR048W YKL187CP34231 750 aa2.68□□□□□ -1.98
CSM3YMR048W CLG1P35190 452 aa2.68□□□□□ -1.98
CSM3YMR048W SFK1P35735 353 aa2.68□□□□□ -1.98
CSM3YMR048W SWD2P36104 329 aaPredicted RBP2.68□□□□□ -1.98
CSM3YMR048W PAU24P38155 120 aa2.68□□□□□ -1.98
CSM3YMR048W PET8P38921 284 aa2.68□□□□□ -1.98
CSM3YMR048W AVT6P40074 448 aa2.68□□□□□ -1.98
CSM3YMR048W DLS1P40366 167 aa2.68□□□□□ -1.98
CSM3YMR048W YIR035CP40579 254 aa2.68□□□□□ -1.98
CSM3YMR048W COX16P47081 118 aa2.68□□□□□ -1.98
CSM3YMR048W YGL118CP53132 145 aa2.68□□□□□ -1.98
CSM3YMR048W RAF1Q06891 181 aa2.68□□□□□ -1.98
CSM3YMR048W SLH1P53327 1967 aaKnown RBP2.68□□□□□ -1.98
CSM3YMR048W FLO9P39712 1322 aa2.68□□□□□ -1.98
CSM3YMR048W NUM1Q00402 2748 aa2.67□□□□□ -1.98
CSM3YMR048W TDH3P00359 332 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
CSM3YMR048W RPL35AP0CX84 120 aaKnown RBP2.67□□□□□ -1.98
CSM3YMR048W RPL35BP0CX85 120 aaKnown RBP2.67□□□□□ -1.98
CSM3YMR048W MEK1P24719 497 aaPredicted RBP2.67□□□□□ -1.98
CSM3YMR048W YCR101CP25607 182 aa2.67□□□□□ -1.98
CSM3YMR048W PAU2P32612 120 aa2.67□□□□□ -1.98
CSM3YMR048W SNC2P33328 115 aa2.67□□□□□ -1.98
CSM3YMR048W RCN1P36054 211 aa2.67□□□□□ -1.98
CSM3YMR048W PRS3P38689 320 aaKnown RBP2.67□□□□□ -1.98
CSM3YMR048W BDH1P39714 382 aa2.67□□□□□ -1.98
CSM3YMR048W YMR144WP40214 342 aaKnown RBP2.67□□□□□ -1.98
CSM3YMR048W RFC4P40339 323 aaKnown RBP2.67□□□□□ -1.98
CSM3YMR048W FMC1P40491 155 aa2.67□□□□□ -1.98
CSM3YMR048W SYS1P41544 203 aa2.67□□□□□ -1.98
CSM3YMR048W LSM1P47017 172 aaKnown RBP2.67□□□□□ -1.98
CSM3YMR048W ARO8P53090 500 aaKnown RBP2.67□□□□□ -1.98
CSM3YMR048W CAX4P53223 239 aa2.67□□□□□ -1.98
CSM3YMR048W SYF2P53277 215 aaPredicted RBP2.67□□□□□ -1.98
CSM3YMR048W YNR066CP53752 436 aa2.67□□□□□ -1.98
CSM3YMR048W DIA1P54005 336 aa2.67□□□□□ -1.98
CSM3YMR048W AIM36Q03798 255 aa2.67□□□□□ -1.98
CSM3YMR048W GPI17Q04080 534 aa2.67□□□□□ -1.98
CSM3YMR048W YDR391CQ04170 232 aa2.67□□□□□ -1.98
CSM3YMR048W YRA1Q12159 226 aaKnown RBP2.67□□□□□ -1.98
CSM3YMR048W YIL002W-AQ3E7Z5 69 aa2.67□□□□□ -1.98
CSM3YMR048W DAL80P26343 269 aa2.66□□□□□ -1.98
CSM3YMR048W FRM2P37261 193 aa2.66□□□□□ -1.98
CSM3YMR048W SWM2P40342 146 aa2.66□□□□□ -1.98
CSM3YMR048W SLM1P40485 686 aa2.66□□□□□ -1.98
CSM3YMR048W PNC1P53184 216 aaKnown RBP2.66□□□□□ -1.98
CSM3YMR048W CTF19Q02732 369 aa2.66□□□□□ -1.98
CSM3YMR048W RCE1Q03530 315 aa2.66□□□□□ -1.98
CSM3YMR048W HNT1Q04344 158 aaKnown RBP2.66□□□□□ -1.98
CSM3YMR048W CTS2Q06350 511 aa2.66□□□□□ -1.98
CSM3YMR048W TAZ1Q06510 381 aa2.66□□□□□ -1.98
CSM3YMR048W YPR195CQ06594 109 aa2.66□□□□□ -1.98
CSM3YMR048W BTS1Q12051 335 aa2.66□□□□□ -1.98
CSM3YMR048W YHR214C-EQ8TGK0 99 aa2.66□□□□□ -1.98
CSM3YMR048W YEL009C-AA0A023PZF2 135 aa2.65□□□□□ -1.99
CSM3YMR048W TDH2P00358 332 aaKnown RBP2.65□□□□□ -1.99
CSM3YMR048W SIR2P06700 562 aa2.65□□□□□ -1.99
CSM3YMR048W DSF1P0CX08 502 aa2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 262.4 ms