RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W DFG10P40526 253 aa3.04□□□□□ -1.92
LCB5YLR260W YIL029CP40538 142 aa3.04□□□□□ -1.92
LCB5YLR260W UFD1P53044 361 aa3.04□□□□□ -1.92
LCB5YLR260W TOS8P53147 276 aa3.04□□□□□ -1.92
LCB5YLR260W YNR048WP53740 393 aa3.04□□□□□ -1.92
LCB5YLR260W IDP3P53982 420 aaKnown RBP3.04□□□□□ -1.92
LCB5YLR260W SWP1Q02795 286 aa3.04□□□□□ -1.92
LCB5YLR260W COA4Q05809 96 aa3.04□□□□□ -1.92
LCB5YLR260W YHC1Q05900 231 aaKnown RBP3.04□□□□□ -1.92
LCB5YLR260W COQ10Q08058 207 aa3.04□□□□□ -1.92
LCB5YLR260W RDL2Q08742 149 aaKnown RBP3.04□□□□□ -1.92
LCB5YLR260W BSC1Q12140 328 aa3.04□□□□□ -1.92
LCB5YLR260W RIB3Q99258 208 aa3.04□□□□□ -1.92
LCB5YLR260W MRS1P07266 363 aa3.04□□□□□ -1.92
LCB5YLR260W SPS100P13130 326 aa3.04□□□□□ -1.92
LCB5YLR260W ARC40P38328 384 aaKnown RBP3.04□□□□□ -1.92
LCB5YLR260W MDM31P38880 579 aa3.04□□□□□ -1.92
LCB5YLR260W NVJ1P38881 321 aa3.04□□□□□ -1.92
LCB5YLR260W YNL208WP40159 199 aaKnown RBP3.04□□□□□ -1.92
LCB5YLR260W AYR1P40471 297 aa3.04□□□□□ -1.92
LCB5YLR260W MCM22P47167 239 aa3.04□□□□□ -1.92
LCB5YLR260W TPN1P53099 579 aa3.04□□□□□ -1.92
LCB5YLR260W TDA1Q03533 586 aa3.04□□□□□ -1.92
LCB5YLR260W SEI1Q06058 285 aa3.04□□□□□ -1.92
LCB5YLR260W YOR342CQ12182 319 aa3.04□□□□□ -1.92
LCB5YLR260W RAX2Q12465 1220 aa3.04□□□□□ -1.92
LCB5YLR260W IGO2Q9P305 131 aa3.04□□□□□ -1.92
LCB5YLR260W YSF3P0C074 85 aaPredicted RBP3.03□□□□□ -1.92
LCB5YLR260W HSP150P32478 413 aa3.03□□□□□ -1.92
LCB5YLR260W PHD1P36093 366 aa3.03□□□□□ -1.92
LCB5YLR260W FRM2P37261 193 aa3.03□□□□□ -1.92
LCB5YLR260W IPI1P38803 334 aaPredicted RBP3.03□□□□□ -1.92
LCB5YLR260W PDS1P40316 373 aaPredicted RBP3.03□□□□□ -1.92
LCB5YLR260W ACT1P60010 375 aaKnown RBP3.03□□□□□ -1.92
LCB5YLR260W IRC15Q02733 499 aa3.03□□□□□ -1.92
LCB5YLR260W PKR1Q03880 122 aaKnown RBP3.03□□□□□ -1.92
LCB5YLR260W HNT1Q04344 158 aaKnown RBP3.03□□□□□ -1.92
LCB5YLR260W FRQ1Q06389 190 aa3.03□□□□□ -1.92
LCB5YLR260W CDC39P25655 2108 aaKnown RBP3.03□□□□□ -1.92
LCB5YLR260W RAS2P01120 322 aaKnown RBP3.02□□□□□ -1.93
LCB5YLR260W YGL041W-AP0C5N3 154 aa3.02□□□□□ -1.93
LCB5YLR260W ERD1P16151 362 aa3.02□□□□□ -1.93
LCB5YLR260W ERD2P18414 219 aa3.02□□□□□ -1.93
LCB5YLR260W YCR100CP25606 316 aa3.02□□□□□ -1.93
LCB5YLR260W INO2P26798 304 aa3.02□□□□□ -1.93
LCB5YLR260W FMP23P38231 175 aa3.02□□□□□ -1.93
LCB5YLR260W YBR137WP38276 179 aa3.02□□□□□ -1.93
LCB5YLR260W ARN1P38731 627 aa3.02□□□□□ -1.93
LCB5YLR260W ECM14P38836 430 aa3.02□□□□□ -1.93
LCB5YLR260W MST28P39552 234 aa3.02□□□□□ -1.93
LCB5YLR260W EGT2P42835 1041 aa3.02□□□□□ -1.93
LCB5YLR260W FAR7P43592 221 aa3.02□□□□□ -1.93
LCB5YLR260W RPE1P46969 238 aa3.02□□□□□ -1.93
LCB5YLR260W DID2P69771 204 aa3.02□□□□□ -1.93
LCB5YLR260W MAK3Q03503 176 aa3.02□□□□□ -1.93
LCB5YLR260W SCS7Q03529 384 aa3.02□□□□□ -1.93
LCB5YLR260W INP1Q03694 420 aa3.02□□□□□ -1.93
LCB5YLR260W UTP15Q04305 513 aaKnown RBP3.02□□□□□ -1.93
LCB5YLR260W PEX30Q06169 523 aa3.02□□□□□ -1.93
LCB5YLR260W IES3Q12345 250 aa3.02□□□□□ -1.93
LCB5YLR260W CDC28P00546 298 aaKnown RBP3.02□□□□□ -1.93
LCB5YLR260W CDC7P06243 507 aa3.02□□□□□ -1.93
LCB5YLR260W GCN3P14741 305 aa3.02□□□□□ -1.93
LCB5YLR260W RPB5P20434 215 aa3.02□□□□□ -1.93
LCB5YLR260W CCA1P21269 546 aa3.02□□□□□ -1.93
LCB5YLR260W YNK1P36010 153 aaKnown RBP3.02□□□□□ -1.93
LCB5YLR260W ECM31P38122 312 aa3.02□□□□□ -1.93
LCB5YLR260W TRR2P38816 342 aa3.02□□□□□ -1.93
LCB5YLR260W LSM4P40070 187 aaKnown RBP3.02□□□□□ -1.93
LCB5YLR260W YMR144WP40214 342 aaKnown RBP3.02□□□□□ -1.93
LCB5YLR260W MOB2P43563 287 aa3.02□□□□□ -1.93
LCB5YLR260W ECO1P43605 281 aa3.02□□□□□ -1.93
LCB5YLR260W BXI1P48558 297 aa3.02□□□□□ -1.93
LCB5YLR260W HSK3P69852 69 aa3.02□□□□□ -1.93
LCB5YLR260W YKR005CQ02203 525 aa3.02□□□□□ -1.93
LCB5YLR260W YDR476CQ03362 224 aa3.02□□□□□ -1.93
LCB5YLR260W RFM1Q12192 310 aa3.02□□□□□ -1.93
LCB5YLR260W YGK3Q12222 375 aaPredicted RBP3.02□□□□□ -1.93
LCB5YLR260W MCT1Q12283 360 aa3.02□□□□□ -1.93
LCB5YLR260W SAS5Q99314 248 aa3.02□□□□□ -1.93
LCB5YLR260W MIR1P23641 311 aaKnown RBP3.01□□□□□ -1.93
LCB5YLR260W SUA7P29055 345 aaPredicted RBP3.01□□□□□ -1.93
LCB5YLR260W OAC1P32332 324 aa3.01□□□□□ -1.93
LCB5YLR260W YBR220CP38318 560 aa3.01□□□□□ -1.93
LCB5YLR260W GLE2P40066 365 aa3.01□□□□□ -1.93
LCB5YLR260W SMX3P54999 86 aaPredicted RBP3.01□□□□□ -1.93
LCB5YLR260W UBC7Q02159 165 aa3.01□□□□□ -1.93
LCB5YLR260W CGI121Q03705 181 aaKnown RBP3.01□□□□□ -1.93
LCB5YLR260W FMN1Q03778 218 aa3.01□□□□□ -1.93
LCB5YLR260W YDR249CQ03787 373 aa3.01□□□□□ -1.93
LCB5YLR260W YDR391CQ04170 232 aa3.01□□□□□ -1.93
LCB5YLR260W LOA1Q06508 300 aa3.01□□□□□ -1.93
LCB5YLR260W ERV2Q12284 196 aa3.01□□□□□ -1.93
LCB5YLR260W FCY2P17064 533 aa3□□□□□ -1.93
LCB5YLR260W RPS1BP23248 255 aaKnown RBP3□□□□□ -1.93
LCB5YLR260W ATG22P25568 528 aa3□□□□□ -1.93
LCB5YLR260W TIP1P27654 210 aaPredicted RBP3□□□□□ -1.93
LCB5YLR260W OCH1P31755 480 aa3□□□□□ -1.93
LCB5YLR260W PDC2P32896 925 aa3□□□□□ -1.93
LCB5YLR260W PET8P38921 284 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms