RNA–Protein interactions for RNA: YIL110W

HPM1, Transcript of AdoMet-dependent methyltransferase, yeast

Gene HPM1, Length 1,134 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HPM1	YIL110W	SML1	Q04964	104 aa		4.11	□□□□□ -1.75
HPM1	YIL110W	TAZ1	Q06510	381 aa		4.11	□□□□□ -1.75
HPM1	YIL110W	YDL218W	Q07629	317 aa		4.11	□□□□□ -1.75
HPM1	YIL110W	RDL2	Q08742	149 aa	Known RBP	4.11	□□□□□ -1.75
HPM1	YIL110W	BRR2	P32639	2163 aa	Known RBP	4.11	□□□□□ -1.75
HPM1	YIL110W	HFA1	P32874	2273 aa		4.11	□□□□□ -1.75
HPM1	YIL110W	RPL40A	P0CH08	128 aa	Known RBP	4.1	□□□□□ -1.75
HPM1	YIL110W	RPL40B	P0CH09	128 aa	Known RBP	4.1	□□□□□ -1.75
HPM1	YIL110W	NSP1	P14907	823 aa	Known RBP	4.1	□□□□□ -1.75
HPM1	YIL110W	ALK2	P32789	676 aa	Predicted RBP	4.1	□□□□□ -1.75
HPM1	YIL110W	PHD1	P36093	366 aa		4.1	□□□□□ -1.75
HPM1	YIL110W	GPX2	P38143	162 aa		4.1	□□□□□ -1.75
HPM1	YIL110W	YBR096W	P38256	230 aa		4.1	□□□□□ -1.75
HPM1	YIL110W	YBR137W	P38276	179 aa		4.1	□□□□□ -1.75
HPM1	YIL110W	TIF34	P40217	347 aa	Known RBP	4.1	□□□□□ -1.75
HPM1	YIL110W	AYR1	P40471	297 aa		4.1	□□□□□ -1.75
HPM1	YIL110W	VHT1	P53241	593 aa		4.1	□□□□□ -1.75
HPM1	YIL110W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
HPM1	YIL110W	RNY1	Q02933	434 aa	Known RBP	4.1	□□□□□ -1.75
HPM1	YIL110W	SPG4	Q04438	115 aa		4.1	□□□□□ -1.75
HPM1	YIL110W	YPR114W	Q06107	315 aa		4.1	□□□□□ -1.75
HPM1	YIL110W	SHH4	Q06236	168 aa		4.1	□□□□□ -1.75
HPM1	YIL110W	HRD1	Q08109	551 aa		4.1	□□□□□ -1.75
HPM1	YIL110W	YPR202W	Q08993	238 aa		4.1	□□□□□ -1.75
HPM1	YIL110W	NAG1	Q8TGN9	163 aa		4.1	□□□□□ -1.75
HPM1	YIL110W	YKR104W	P0CE69	306 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	GRX2	P17695	143 aa	Known RBP	4.09	□□□□□ -1.75
HPM1	YIL110W	FUN26	P31381	517 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	YKL075C	P36083	450 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	RPS20	P38701	121 aa	Known RBP	4.09	□□□□□ -1.75
HPM1	YIL110W	PEX22	P39718	180 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	YIL067C	P40514	678 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	BUD13	P46947	266 aa	Predicted RBP	4.09	□□□□□ -1.75
HPM1	YIL110W	HHO1	P53551	258 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	NRM1	P53718	249 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	CRZ1	P53968	678 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	RHO4	Q00246	291 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	GMC1	Q04399	608 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	ERP1	Q05359	219 aa	Known RBP	4.09	□□□□□ -1.75
HPM1	YIL110W	FAR10	Q06001	478 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	PEX30	Q06169	523 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	ZEO1	Q08245	113 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	RFM1	Q12192	310 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	EAF3	Q12432	401 aa		4.09	□□□□□ -1.75
HPM1	YIL110W	HTZ1	Q12692	134 aa	Known RBP	4.09	□□□□□ -1.75
HPM1	YIL110W	SNF4	P12904	322 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	PET9	P18239	318 aa	Known RBP	4.08	□□□□□ -1.76
HPM1	YIL110W	RPL16A	P26784	199 aa	Known RBP	4.08	□□□□□ -1.76
HPM1	YIL110W	ARO7	P32178	256 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	AEP1	P32493	518 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	PAN3	P36102	679 aa	Predicted RBP	4.08	□□□□□ -1.76
HPM1	YIL110W	UTH1	P36135	365 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	MTC6	P38849	526 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	CHL4	P38907	458 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	GLC8	P41818	229 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	BIR1	P47134	954 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	AVT4	P50944	713 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	YGL034C	P53186	121 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	SUR7	P54003	302 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	YMR166C	Q03829	368 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	GPI17	Q04080	534 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	SCW10	Q04951	389 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	ATG39	Q06159	398 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	ATG10	Q07879	167 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	FCY1	Q12178	158 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	YMR230W-A	Q3E7B5	62 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	YKL068W-A	Q3E826	78 aa		4.08	□□□□□ -1.76
HPM1	YIL110W	YMR316C-A	I2HB70	103 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	YAL064W-B	O13512	126 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	CAP2	P13517	287 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	YCR100C	P25606	316 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	PHA2	P32452	334 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	APS1	P35181	156 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	SFK1	P35735	353 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
HPM1	YIL110W	TIM17	P39515	158 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	OST2	P46964	130 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	IKS1	P47042	667 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	SOL1	P50278	321 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	YGR018C	P53211	109 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	YNR048W	P53740	393 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	YNL184C	P53876	108 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	ACT1	P60010	375 aa	Known RBP	4.07	□□□□□ -1.76
HPM1	YIL110W	NUP100	Q02629	959 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	HPT1	Q04178	221 aa	Known RBP	4.07	□□□□□ -1.76
HPM1	YIL110W	CNL1	Q06333	122 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	SLD7	Q08457	257 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	TIM18	Q08749	192 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	BSC1	Q12140	328 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	MCT1	Q12283	360 aa		4.07	□□□□□ -1.76
HPM1	YIL110W	RPL2A	P0CX45	254 aa	Known RBP	4.06	□□□□□ -1.76
HPM1	YIL110W	RPL2B	P0CX46	254 aa	Known RBP	4.06	□□□□□ -1.76
HPM1	YIL110W	CNB1	P25296	175 aa		4.06	□□□□□ -1.76
HPM1	YIL110W	YCR007C	P25354	239 aa		4.06	□□□□□ -1.76
HPM1	YIL110W	ERG24	P32462	438 aa	Known RBP	4.06	□□□□□ -1.76
HPM1	YIL110W	SNC2	P33328	115 aa		4.06	□□□□□ -1.76
HPM1	YIL110W	TRR2	P38816	342 aa		4.06	□□□□□ -1.76
HPM1	YIL110W	YEA4	P40004	342 aa		4.06	□□□□□ -1.76
HPM1	YIL110W	SIM1	P40472	476 aa		4.06	□□□□□ -1.76
HPM1	YIL110W	SER2	P42941	309 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 84.5 ms