RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W UPS1Q05776 175 aa5.16□□□□□ -1.58
RPT3YDR394W PRP11Q07350 266 aaPredicted RBP5.16□□□□□ -1.58
RPT3YDR394W PAM18Q07914 168 aa5.16□□□□□ -1.58
RPT3YDR394W CSF1Q12150 2958 aa5.16□□□□□ -1.58
RPT3YDR394W FRE8Q12209 686 aa5.16□□□□□ -1.58
RPT3YDR394W YPR071WQ12346 211 aa5.16□□□□□ -1.58
RPT3YDR394W AIM45Q12480 344 aaKnown RBP5.16□□□□□ -1.58
RPT3YDR394W ATG40Q99325 256 aa5.16□□□□□ -1.58
RPT3YDR394W GDH1P07262 454 aaKnown RBP5.15□□□□□ -1.59
RPT3YDR394W RIP1P08067 215 aa5.15□□□□□ -1.59
RPT3YDR394W MSI1P13712 422 aa5.15□□□□□ -1.59
RPT3YDR394W SWD3P38123 315 aa5.15□□□□□ -1.59
RPT3YDR394W YER084WP40057 128 aa5.15□□□□□ -1.59
RPT3YDR394W HXT14P42833 540 aa5.15□□□□□ -1.59
RPT3YDR394W EGT2P42835 1041 aa5.15□□□□□ -1.59
RPT3YDR394W MOG1P47123 218 aa5.15□□□□□ -1.59
RPT3YDR394W YIP5P53108 310 aa5.15□□□□□ -1.59
RPT3YDR394W MSO1P53604 210 aaKnown RBP5.15□□□□□ -1.59
RPT3YDR394W YMR279CQ03263 540 aa5.15□□□□□ -1.59
RPT3YDR394W DPB4Q04603 196 aaKnown RBP5.15□□□□□ -1.59
RPT3YDR394W RAF1Q06891 181 aa5.15□□□□□ -1.59
RPT3YDR394W MPD1Q12404 318 aaKnown RBP5.15□□□□□ -1.59
RPT3YDR394W MAK32P23060 363 aa5.14□□□□□ -1.59
RPT3YDR394W ERV1P27882 189 aa5.14□□□□□ -1.59
RPT3YDR394W IMP1P28627 190 aa5.14□□□□□ -1.59
RPT3YDR394W REC104P33323 182 aa5.14□□□□□ -1.59
RPT3YDR394W MRPS5P33759 307 aa5.14□□□□□ -1.59
RPT3YDR394W RIB5P38145 238 aa5.14□□□□□ -1.59
RPT3YDR394W MTC6P38849 526 aa5.14□□□□□ -1.59
RPT3YDR394W PEF1P53238 335 aa5.14□□□□□ -1.59
RPT3YDR394W YPL067CQ02754 198 aa5.14□□□□□ -1.59
RPT3YDR394W YDC1Q02896 317 aa5.14□□□□□ -1.59
RPT3YDR394W ADD37Q03233 198 aa5.14□□□□□ -1.59
RPT3YDR394W LRS4Q04087 347 aaKnown RBP5.14□□□□□ -1.59
RPT3YDR394W TSA2Q04120 196 aa5.14□□□□□ -1.59
RPT3YDR394W YLR179CQ06252 201 aaKnown RBP5.14□□□□□ -1.59
RPT3YDR394W YOR292CQ08743 309 aa5.14□□□□□ -1.59
RPT3YDR394W RRS1Q08746 203 aaKnown RBP5.14□□□□□ -1.59
RPT3YDR394W FIT3Q08907 204 aa5.14□□□□□ -1.59
RPT3YDR394W NCE102Q12207 173 aaRIP-Chip data5.14□□□□□ -1.59not detected
RPT3YDR394W SNU23Q12368 194 aaPredicted RBP5.14□□□□□ -1.59
RPT3YDR394W AGC1Q12482 902 aa5.14□□□□□ -1.59
RPT3YDR394W COA2Q3E823 68 aa5.14□□□□□ -1.59
RPT3YDR394W HUG1Q6Q5K6 68 aa5.14□□□□□ -1.59
RPT3YDR394W YMR262WP38430 313 aa5.13□□□□□ -1.59
RPT3YDR394W PIG2P40187 538 aa5.13□□□□□ -1.59
RPT3YDR394W RFC2P40348 353 aa5.13□□□□□ -1.59
RPT3YDR394W FLX1P40464 311 aa5.13□□□□□ -1.59
RPT3YDR394W GTT1P40582 234 aa5.13□□□□□ -1.59
RPT3YDR394W TAF4P50105 388 aa5.13□□□□□ -1.59
RPT3YDR394W SIP18P50263 79 aa5.13□□□□□ -1.59
RPT3YDR394W TIM21P53220 239 aa5.13□□□□□ -1.59
RPT3YDR394W SNO1Q03144 224 aa5.13□□□□□ -1.59
RPT3YDR394W GMC1Q04399 608 aa5.13□□□□□ -1.59
RPT3YDR394W HOF1Q05080 669 aa5.13□□□□□ -1.59
RPT3YDR394W HRD1Q08109 551 aa5.13□□□□□ -1.59
RPT3YDR394W YOL024WQ08172 172 aa5.13□□□□□ -1.59
RPT3YDR394W YPL264CQ08980 353 aa5.13□□□□□ -1.59
RPT3YDR394W DGK1Q12382 290 aa5.13□□□□□ -1.59
RPT3YDR394W RPL35AP0CX84 120 aaKnown RBP5.12□□□□□ -1.59
RPT3YDR394W RPL35BP0CX85 120 aaKnown RBP5.12□□□□□ -1.59
RPT3YDR394W ATG15P25641 520 aa5.12□□□□□ -1.59
RPT3YDR394W CLB6P32943 380 aa5.12□□□□□ -1.59
RPT3YDR394W MRPL4P36517 319 aa5.12□□□□□ -1.59
RPT3YDR394W ATG8P38182 117 aaRIP-Chip data5.12□□□□□ -1.59not detected
RPT3YDR394W MOH1P38191 138 aa5.12□□□□□ -1.59
RPT3YDR394W SMD3P43321 101 aaKnown RBP5.12□□□□□ -1.59
RPT3YDR394W PDR17P53844 350 aa5.12□□□□□ -1.59
RPT3YDR394W RIM9Q04734 239 aa5.12□□□□□ -1.59
RPT3YDR394W YMR253CQ04835 414 aa5.12□□□□□ -1.59
RPT3YDR394W PRR2Q12310 699 aa5.12□□□□□ -1.59
RPT3YDR394W BRR2P32639 2163 aaKnown RBP5.11□□□□□ -1.59
RPT3YDR394W HEM4P06174 275 aa5.11□□□□□ -1.59
RPT3YDR394W ADH3P07246 375 aaKnown RBP5.11□□□□□ -1.59
RPT3YDR394W TRP4P07285 380 aaPredicted RBP5.11□□□□□ -1.59
RPT3YDR394W SEC59P20048 519 aa5.11□□□□□ -1.59
RPT3YDR394W MRS4P23500 304 aa5.11□□□□□ -1.59
RPT3YDR394W ACP1P32463 125 aa5.11□□□□□ -1.59
RPT3YDR394W RPN14P53196 417 aa5.11□□□□□ -1.59
RPT3YDR394W LIP2Q06005 328 aa5.11□□□□□ -1.59
RPT3YDR394W YOR015WQ12169 119 aa5.11□□□□□ -1.59
RPT3YDR394W YPR145C-AQ2V2P0 78 aa5.11□□□□□ -1.59
RPT3YDR394W YOR192C-CQ3E736 78 aa5.11□□□□□ -1.59
RPT3YDR394W CDC7P06243 507 aa5.1□□□□□ -1.59
RPT3YDR394W APA2P22108 325 aa5.1□□□□□ -1.59
RPT3YDR394W YOX1P34161 385 aa5.1□□□□□ -1.59
RPT3YDR394W UPS2P35200 230 aa5.1□□□□□ -1.59
RPT3YDR394W TRS20P38334 175 aa5.1□□□□□ -1.59
RPT3YDR394W YEL057CP39983 233 aa5.1□□□□□ -1.59
RPT3YDR394W PHS1P40857 217 aa5.1□□□□□ -1.59
RPT3YDR394W VMA21P41806 77 aa5.1□□□□□ -1.59
RPT3YDR394W YGL262WP53054 175 aa5.1□□□□□ -1.59
RPT3YDR394W YGR026WP53217 278 aa5.1□□□□□ -1.59
RPT3YDR394W SKO1Q02100 647 aa5.1□□□□□ -1.59
RPT3YDR394W FSH2Q05015 223 aa5.1□□□□□ -1.59
RPT3YDR394W DXO1Q06349 442 aa5.1□□□□□ -1.59
RPT3YDR394W YDL242WQ07746 117 aa5.1□□□□□ -1.59
RPT3YDR394W YOL118CQ08259 102 aa5.1□□□□□ -1.59
RPT3YDR394W FCY22Q12119 530 aa5.1□□□□□ -1.59
RPT3YDR394W YBR255C-AQ3E776 120 aa5.1□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms