RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeastyeast

Gene CSN9, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSN9YDR179C TVP23P38962 199 aa-0.03□□□□□ -2.41
CSN9YDR179C FYV6P53913 173 aa-0.03□□□□□ -2.41
CSN9YDR179C PRM3Q08931 133 aa-0.03□□□□□ -2.41
CSN9YDR179C CCW12Q12127 133 aa-0.03□□□□□ -2.41
CSN9YDR179C SPO13P23624 291 aa-0.04□□□□□ -2.42
CSN9YDR179C PTM1P32857 523 aa-0.04□□□□□ -2.42
CSN9YDR179C APS1P35181 156 aa-0.04□□□□□ -2.42
CSN9YDR179C AST2P39945 430 aaKnown RBP-0.04□□□□□ -2.42
CSN9YDR179C RMD6P39975 231 aa-0.04□□□□□ -2.42
CSN9YDR179C MED4Q12343 284 aa-0.04□□□□□ -2.42
CSN9YDR179C ODC2Q99297 307 aa-0.04□□□□□ -2.42
CSN9YDR179C RPB3P16370 318 aaKnown RBP-0.05□□□□□ -2.42
CSN9YDR179C IDH1P28834 360 aaKnown RBP RIP-Chip data-0.05□□□□□ -2.42not detected
CSN9YDR179C SSO1P32867 290 aa-0.05□□□□□ -2.42
CSN9YDR179C YHL037CP38733 133 aa-0.05□□□□□ -2.42
CSN9YDR179C YAR064WP39563 99 aa-0.05□□□□□ -2.42
CSN9YDR179C LIA1P47120 325 aaKnown RBP-0.05□□□□□ -2.42
CSN9YDR179C PRP11Q07350 266 aaPredicted RBP-0.05□□□□□ -2.42
CSN9YDR179C DGA1Q08650 418 aa-0.05□□□□□ -2.42
CSN9YDR179C SEY1Q99287 776 aa-0.05□□□□□ -2.42
CSN9YDR179C CDC28P00546 298 aaKnown RBP-0.06□□□□□ -2.42
CSN9YDR179C CKS1P20486 150 aaKnown RBP-0.06□□□□□ -2.42
CSN9YDR179C YHL018WP38744 120 aaPredicted RBP-0.06□□□□□ -2.42
CSN9YDR179C DCV1P43595 202 aa-0.06□□□□□ -2.42
CSN9YDR179C BXI1P48558 297 aa-0.06□□□□□ -2.42
CSN9YDR179C BRR6P53062 197 aa-0.06□□□□□ -2.42
CSN9YDR179C YNL134CP53912 376 aaKnown RBP-0.06□□□□□ -2.42
CSN9YDR179C FYV12Q08559 129 aa-0.06□□□□□ -2.42
CSN9YDR179C YOL107WQ12239 342 aa-0.06□□□□□ -2.42
CSN9YDR179C IKI3Q06706 1349 aaKnown RBP-0.07□□□□□ -2.42
CSN9YDR179C RPO26P20435 155 aa-0.07□□□□□ -2.42
CSN9YDR179C ATP15P21306 62 aa-0.07□□□□□ -2.42
CSN9YDR179C YFL051CP43552 160 aa-0.07□□□□□ -2.42
CSN9YDR179C BNA6P43619 295 aa-0.07□□□□□ -2.42
CSN9YDR179C ALB1P47019 175 aaPredicted RBP-0.07□□□□□ -2.42
CSN9YDR179C GET1P53192 235 aa-0.07□□□□□ -2.42
CSN9YDR179C ATG31Q12421 196 aa-0.07□□□□□ -2.42
CSN9YDR179C RRP36Q12481 300 aaPredicted RBP-0.07□□□□□ -2.42
CSN9YDR179C COX8P04039 78 aa-0.08□□□□□ -2.42
CSN9YDR179C COX15P40086 486 aa-0.08□□□□□ -2.42
CSN9YDR179C MPC3P53311 146 aa-0.08□□□□□ -2.42
CSN9YDR179C RRN5Q02983 363 aa-0.08□□□□□ -2.42
CSN9YDR179C MET31Q03081 177 aa-0.08□□□□□ -2.42
CSN9YDR179C ABP140Q08641 628 aaKnown RBP-0.08□□□□□ -2.42
CSN9YDR179C MAG1P22134 296 aaKnown RBP-0.09□□□□□ -2.42
CSN9YDR179C ARO7P32178 256 aa-0.09□□□□□ -2.42
CSN9YDR179C SFK1P35735 353 aa-0.09□□□□□ -2.42
CSN9YDR179C YJR111CP47148 283 aaKnown RBP-0.09□□□□□ -2.42
CSN9YDR179C MIC26P50087 233 aa-0.09□□□□□ -2.42
CSN9YDR179C YGR050CP53231 118 aa-0.09□□□□□ -2.42
CSN9YDR179C KAP95Q06142 861 aaKnown RBP-0.09□□□□□ -2.42
CSN9YDR179C FIT2Q08906 153 aa-0.09□□□□□ -2.42
CSN9YDR179C CFT1Q06632 1357 aaKnown RBP-0.09□□□□□ -2.42
CSN9YDR179C POR1P04840 283 aaKnown RBP-0.1□□□□□ -2.43
CSN9YDR179C PAN3P36102 679 aaPredicted RBP-0.1□□□□□ -2.43
CSN9YDR179C MAK5P38112 773 aaPredicted RBP-0.1□□□□□ -2.43
CSN9YDR179C RPC17P47076 161 aa-0.1□□□□□ -2.43
CSN9YDR179C THG1P53215 237 aaKnown RBP-0.1□□□□□ -2.43
CSN9YDR179C HNT1Q04344 158 aaKnown RBP-0.1□□□□□ -2.43
CSN9YDR179C FIT1Q04433 528 aa-0.1□□□□□ -2.43
CSN9YDR179C YFR032C-BQ8TGU2 87 aa-0.1□□□□□ -2.43
CSN9YDR179C SEC4P07560 215 aaKnown RBP-0.11□□□□□ -2.43
CSN9YDR179C FMC1P40491 155 aa-0.11□□□□□ -2.43
CSN9YDR179C GCN20P43535 752 aaKnown RBP-0.11□□□□□ -2.43
CSN9YDR179C YJR015WP47090 510 aa-0.11□□□□□ -2.43
CSN9YDR179C NOP19P53317 196 aaPredicted RBP-0.11□□□□□ -2.43
CSN9YDR179C COG5P53951 403 aa-0.11□□□□□ -2.43
CSN9YDR179C SRL4Q03085 281 aa-0.11□□□□□ -2.43
CSN9YDR179C YMR295CQ03559 197 aa-0.11□□□□□ -2.43
CSN9YDR179C YLR283WQ05867 314 aa-0.11□□□□□ -2.43
CSN9YDR179C IRC23Q08416 157 aa-0.11□□□□□ -2.43
CSN9YDR179C YPR013CQ12145 317 aa-0.11□□□□□ -2.43
CSN9YDR179C RPL25P04456 142 aaKnown RBP-0.12□□□□□ -2.43
CSN9YDR179C SEN2P16658 377 aa-0.12□□□□□ -2.43
CSN9YDR179C PHO85P17157 305 aa-0.12□□□□□ -2.43
CSN9YDR179C YCR090CP25654 182 aaKnown RBP-0.12□□□□□ -2.43
CSN9YDR179C LDB7P38210 180 aa-0.12□□□□□ -2.43
CSN9YDR179C VPS71Q03433 280 aa-0.12□□□□□ -2.43
CSN9YDR179C DYN3Q04949 312 aa-0.12□□□□□ -2.43
CSN9YDR179C GSP2P32836 220 aaKnown RBP-0.13□□□□□ -2.43
CSN9YDR179C SBH2P52871 88 aa-0.13□□□□□ -2.43
CSN9YDR179C TMA23Q03525 211 aa-0.13□□□□□ -2.43
CSN9YDR179C RNH202Q05635 350 aa-0.13□□□□□ -2.43
CSN9YDR179C YHR213W-BQ8TGK1 99 aa-0.13□□□□□ -2.43
CSN9YDR179C GCN3P14741 305 aa-0.14□□□□□ -2.43
CSN9YDR179C YPK2P18961 677 aa-0.14□□□□□ -2.43
CSN9YDR179C OCH1P31755 480 aa-0.14□□□□□ -2.43
CSN9YDR179C ARP3P47117 449 aaKnown RBP-0.14□□□□□ -2.43
CSN9YDR179C SHH3Q04487 196 aa-0.14□□□□□ -2.43
CSN9YDR179C ELP6Q04868 273 aa-0.14□□□□□ -2.43
CSN9YDR179C GET4Q12125 312 aa-0.14□□□□□ -2.43
CSN9YDR179C TAR1Q8TGM6 124 aa-0.14□□□□□ -2.43
CSN9YDR179C HMF1P40037 129 aaKnown RBP-0.15□□□□□ -2.43
CSN9YDR179C LSM7P53905 115 aaKnown RBP-0.15□□□□□ -2.43
CSN9YDR179C PET191Q02772 108 aa-0.15□□□□□ -2.43
CSN9YDR179C YNG1Q08465 219 aa-0.15□□□□□ -2.43
CSN9YDR179C YHR214C-EQ8TGK0 99 aa-0.15□□□□□ -2.43
CSN9YDR179C TRM5P38793 499 aa-0.16□□□□□ -2.44
CSN9YDR179C AIM2P39721 246 aa-0.16□□□□□ -2.44
CSN9YDR179C YER134CP40081 178 aa-0.16□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 64.9 ms