RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A ATG41Q12048 136 aa-0.31□□□□□ -2.46
TFB5YDR079C-A RIO1Q12196 484 aaKnown RBP-0.31□□□□□ -2.46
TFB5YDR079C-A GPM3Q12326 303 aa-0.31□□□□□ -2.46
TFB5YDR079C-A ATG5Q12380 294 aa-0.31□□□□□ -2.46
TFB5YDR079C-A AGC1Q12482 902 aa-0.31□□□□□ -2.46
TFB5YDR079C-A EFG1Q3E705 233 aaKnown RBP-0.31□□□□□ -2.46
TFB5YDR079C-A YOR034C-AQ3E735 80 aa-0.31□□□□□ -2.46
TFB5YDR079C-A YGR121W-AQ3E816 71 aa-0.31□□□□□ -2.46
TFB5YDR079C-A RIB3Q99258 208 aa-0.31□□□□□ -2.46
TFB5YDR079C-A MYO1P08964 1928 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YAR066WP0CX18 203 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YHR214WP0CX19 203 aa-0.32□□□□□ -2.46
TFB5YDR079C-A SEC22P22214 214 aa-0.32□□□□□ -2.46
TFB5YDR079C-A MRS4P23500 304 aa-0.32□□□□□ -2.46
TFB5YDR079C-A GIT1P25346 518 aa-0.32□□□□□ -2.46
TFB5YDR079C-A CTR86P25355 563 aa-0.32□□□□□ -2.46
TFB5YDR079C-A ATG22P25568 528 aa-0.32□□□□□ -2.46
TFB5YDR079C-A IMP1P28627 190 aa-0.32□□□□□ -2.46
TFB5YDR079C-A CAM1P29547 415 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A DEP1P31385 405 aa-0.32□□□□□ -2.46
TFB5YDR079C-A VMA6P32366 345 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A EFB1P32471 206 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A PRP21P32524 280 aaPredicted RBP-0.32□□□□□ -2.46
TFB5YDR079C-A ARC19P33204 171 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A NIP100P33420 868 aa-0.32□□□□□ -2.46
TFB5YDR079C-A PRX1P34227 261 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A KTI12P34253 313 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A CPR5P35176 225 aa-0.32□□□□□ -2.46
TFB5YDR079C-A AST1P35183 429 aa-0.32□□□□□ -2.46
TFB5YDR079C-A MRPL38P35996 138 aaPredicted RBP-0.32□□□□□ -2.46
TFB5YDR079C-A TEF4P36008 412 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A RRP14P36080 434 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A YKL071WP36086 256 aa-0.32□□□□□ -2.46
TFB5YDR079C-A AUR1P36107 401 aaPredicted RBP-0.32□□□□□ -2.46
TFB5YDR079C-A YKR045CP36138 183 aa-0.32□□□□□ -2.46
TFB5YDR079C-A FSH1P38777 243 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A RPF1P38805 295 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A GEP4P38812 185 aa-0.32□□□□□ -2.46
TFB5YDR079C-A MST28P39552 234 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YHB1P39676 399 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A YEL008WP40001 126 aa-0.32□□□□□ -2.46
TFB5YDR079C-A LCP5P40079 357 aaPredicted RBP-0.32□□□□□ -2.46
TFB5YDR079C-A RIO2P40160 425 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A IST3P40565 148 aaPredicted RBP-0.32□□□□□ -2.46
TFB5YDR079C-A SAS2P40963 338 aa-0.32□□□□□ -2.46
TFB5YDR079C-A ERR3P42222 437 aa-0.32□□□□□ -2.46
TFB5YDR079C-A BNA6P43619 295 aa-0.32□□□□□ -2.46
TFB5YDR079C-A CIN2P46670 268 aa-0.32□□□□□ -2.46
TFB5YDR079C-A BUD13P46947 266 aaPredicted RBP-0.32□□□□□ -2.46
TFB5YDR079C-A GON7P46984 123 aa-0.32□□□□□ -2.46
TFB5YDR079C-A MRX5P47007 382 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YAE1P47118 141 aaPredicted RBP-0.32□□□□□ -2.46
TFB5YDR079C-A AIM24P47127 394 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YJR111CP47148 283 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A EFM3P47163 339 aa-0.32□□□□□ -2.46
TFB5YDR079C-A TTI2P47168 421 aa-0.32□□□□□ -2.46
TFB5YDR079C-A DSK2P48510 373 aa-0.32□□□□□ -2.46
TFB5YDR079C-A GPI8P49018 411 aa-0.32□□□□□ -2.46
TFB5YDR079C-A RPL9BP51401 191 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A YGL262WP53054 175 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YPS5P53057 165 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YGL159WP53110 370 aa-0.32□□□□□ -2.46
TFB5YDR079C-A MST27P53176 234 aa-0.32□□□□□ -2.46
TFB5YDR079C-A OKP1P53298 406 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YIP3P53633 176 aa-0.32□□□□□ -2.46
TFB5YDR079C-A MRPS12P53732 153 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YNR048WP53740 393 aa-0.32□□□□□ -2.46
TFB5YDR079C-A POP3P53833 195 aaPredicted RBP-0.32□□□□□ -2.46
TFB5YDR079C-A CWC25P53854 179 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A ERI1P62651 68 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A RPA49Q01080 415 aaPredicted RBP-0.32□□□□□ -2.46
TFB5YDR079C-A YPL067CQ02754 198 aa-0.32□□□□□ -2.46
TFB5YDR079C-A FIN1Q03898 291 aa-0.32□□□□□ -2.46
TFB5YDR079C-A CAB5Q03941 241 aa-0.32□□□□□ -2.46
TFB5YDR079C-A HPT1Q04178 221 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A PDS5Q04264 1277 aa-0.32□□□□□ -2.46
TFB5YDR079C-A GTO3Q04806 366 aa-0.32□□□□□ -2.46
TFB5YDR079C-A VPS38Q05919 439 aa-0.32□□□□□ -2.46
TFB5YDR079C-A SSQ1Q05931 657 aaPredicted RBP-0.32□□□□□ -2.46
TFB5YDR079C-A LIP2Q06005 328 aa-0.32□□□□□ -2.46
TFB5YDR079C-A PBP4Q07362 185 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A LDB18Q07887 179 aa-0.32□□□□□ -2.46
TFB5YDR079C-A THP1Q08231 455 aa-0.32□□□□□ -2.46
TFB5YDR079C-A PGC1Q08959 321 aa-0.32□□□□□ -2.46
TFB5YDR079C-A ATG29Q12092 213 aa-0.32□□□□□ -2.46
TFB5YDR079C-A CCW12Q12127 133 aa-0.32□□□□□ -2.46
TFB5YDR079C-A LSP1Q12230 341 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A YOL114CQ12322 202 aa-0.32□□□□□ -2.46
TFB5YDR079C-A ORT1Q12375 292 aa-0.32□□□□□ -2.46
TFB5YDR079C-A EMP46Q12396 444 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YDL199CQ12407 687 aa-0.32□□□□□ -2.46
TFB5YDR079C-A RRP36Q12481 300 aaPredicted RBP-0.32□□□□□ -2.46
TFB5YDR079C-A NOP58Q12499 511 aaKnown RBP-0.32□□□□□ -2.46
TFB5YDR079C-A YPL119C-AQ3E751 87 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YNL146C-AQ3E7Z1 64 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YNL042W-BQ3E7Z2 85 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YOR011W-AQ3E807 68 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YOR072W-BQ3E832 53 aa-0.32□□□□□ -2.46
TFB5YDR079C-A YHR214C-EQ8TGK0 99 aa-0.32□□□□□ -2.46
TFB5YDR079C-A DDP1Q99321 188 aaKnown RBP-0.32□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 158.7 ms