RNA–Protein interactions for RNA: YCR097W

HMRA1, Transcript of Silenced copy of a1 at HMR, yeastyeast

Gene HMRA1, Length 381 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMRA1YCR097W MRPL37P36532 105 aa-0.48□□□□□ -2.49
HMRA1YCR097W CUE1P38428 203 aa-0.48□□□□□ -2.49
HMRA1YCR097W AST2P39945 430 aaKnown RBP-0.48□□□□□ -2.49
HMRA1YCR097W ALB1P47019 175 aaPredicted RBP-0.48□□□□□ -2.49
HMRA1YCR097W AIM25P47140 327 aa-0.48□□□□□ -2.49
HMRA1YCR097W TRM9P49957 279 aa-0.48□□□□□ -2.49
HMRA1YCR097W UBC12P52491 188 aa-0.48□□□□□ -2.49
HMRA1YCR097W VPS71Q03433 280 aa-0.48□□□□□ -2.49
HMRA1YCR097W TMA23Q03525 211 aa-0.48□□□□□ -2.49
HMRA1YCR097W CDC123Q05791 360 aa-0.48□□□□□ -2.49
HMRA1YCR097W DGA1Q08650 418 aa-0.48□□□□□ -2.49
HMRA1YCR097W KSS1P14681 368 aa-0.49□□□□□ -2.49
HMRA1YCR097W ARO7P32178 256 aa-0.49□□□□□ -2.49
HMRA1YCR097W YDR249CQ03787 373 aa-0.49□□□□□ -2.49
HMRA1YCR097W ELP6Q04868 273 aa-0.49□□□□□ -2.49
HMRA1YCR097W ABP140Q08641 628 aaKnown RBP-0.49□□□□□ -2.49
HMRA1YCR097W SEN2P16658 377 aa-0.5□□□□□ -2.49
HMRA1YCR097W YCR001WP25347 104 aa-0.5□□□□□ -2.49
HMRA1YCR097W SFK1P35735 353 aa-0.5□□□□□ -2.49
HMRA1YCR097W PAN3P36102 679 aaPredicted RBP-0.5□□□□□ -2.49
HMRA1YCR097W MAK5P38112 773 aaPredicted RBP-0.5□□□□□ -2.49
HMRA1YCR097W RMD6P39975 231 aa-0.5□□□□□ -2.49
HMRA1YCR097W HOC1P47124 396 aa-0.5□□□□□ -2.49
HMRA1YCR097W GET1P53192 235 aa-0.5□□□□□ -2.49
HMRA1YCR097W MPC3P53311 146 aa-0.5□□□□□ -2.49
HMRA1YCR097W MRPL50P53724 139 aa-0.5□□□□□ -2.49
HMRA1YCR097W SEY1Q99287 776 aa-0.5□□□□□ -2.49
HMRA1YCR097W CDC28P00546 298 aaKnown RBP-0.51□□□□□ -2.49
HMRA1YCR097W POR1P04840 283 aaKnown RBP-0.51□□□□□ -2.49
HMRA1YCR097W BCY1P07278 416 aaKnown RBP-0.51□□□□□ -2.49
HMRA1YCR097W RPB3P16370 318 aaKnown RBP-0.51□□□□□ -2.49
HMRA1YCR097W CKS1P20486 150 aaKnown RBP-0.51□□□□□ -2.49
HMRA1YCR097W ATP15P21306 62 aa-0.51□□□□□ -2.49
HMRA1YCR097W OPI1P21957 404 aa-0.51□□□□□ -2.49
HMRA1YCR097W IDH1P28834 360 aaKnown RBP RIP-Chip data-0.51□□□□□ -2.49not detected
HMRA1YCR097W HHY1P39982 102 aa-0.51□□□□□ -2.49
HMRA1YCR097W SBH2P52871 88 aa-0.51□□□□□ -2.49
HMRA1YCR097W MGA1P53050 456 aa-0.51□□□□□ -2.49
HMRA1YCR097W IKI3Q06706 1349 aaKnown RBP-0.51□□□□□ -2.49
HMRA1YCR097W IRC23Q08416 157 aa-0.51□□□□□ -2.49
HMRA1YCR097W TAR1Q8TGM6 124 aa-0.51□□□□□ -2.49
HMRA1YCR097W CFT1Q06632 1357 aaKnown RBP-0.52□□□□□ -2.49
HMRA1YCR097W SPT3P06844 337 aa-0.52□□□□□ -2.49
HMRA1YCR097W YOL013W-AP0C272 63 aaPredicted RBP-0.52□□□□□ -2.49
HMRA1YCR097W URA6P15700 204 aa-0.52□□□□□ -2.49
HMRA1YCR097W OM45P16547 393 aa-0.52□□□□□ -2.49
HMRA1YCR097W MRPL25P23369 157 aa-0.52□□□□□ -2.49
HMRA1YCR097W GSP2P32836 220 aaKnown RBP-0.52□□□□□ -2.49
HMRA1YCR097W PTC1P35182 281 aa-0.52□□□□□ -2.49
HMRA1YCR097W FAR7P43592 221 aa-0.52□□□□□ -2.49
HMRA1YCR097W THG1P53215 237 aaKnown RBP-0.52□□□□□ -2.49
HMRA1YCR097W YKR005CQ02203 525 aa-0.52□□□□□ -2.49
HMRA1YCR097W PET191Q02772 108 aa-0.52□□□□□ -2.49
HMRA1YCR097W RRN5Q02983 363 aa-0.52□□□□□ -2.49
HMRA1YCR097W RNH202Q05635 350 aa-0.52□□□□□ -2.49
HMRA1YCR097W YLR307C-AQ3E825 87 aa-0.52□□□□□ -2.49
HMRA1YCR097W HFA1P32874 2273 aa-0.53□□□□□ -2.49
HMRA1YCR097W TCA17P32613 152 aa-0.53□□□□□ -2.49
HMRA1YCR097W APS1P35181 156 aa-0.53□□□□□ -2.49
HMRA1YCR097W BXI1P48558 297 aa-0.53□□□□□ -2.49
HMRA1YCR097W FYV6P53913 173 aa-0.53□□□□□ -2.49
HMRA1YCR097W YDC1Q02896 317 aa-0.53□□□□□ -2.49
HMRA1YCR097W YMR295CQ03559 197 aa-0.53□□□□□ -2.49
HMRA1YCR097W KRE28Q04431 385 aa-0.53□□□□□ -2.49
HMRA1YCR097W UPS1Q05776 175 aa-0.53□□□□□ -2.49
HMRA1YCR097W GET4Q12125 312 aa-0.53□□□□□ -2.49
HMRA1YCR097W JLP1Q12358 412 aa-0.53□□□□□ -2.49
HMRA1YCR097W YFR032C-BQ8TGU2 87 aa-0.53□□□□□ -2.49
HMRA1YCR097W RPL43AP0CX25 92 aaKnown RBP-0.54□□□□□ -2.5
HMRA1YCR097W RPL43BP0CX26 92 aa-0.54□□□□□ -2.5
HMRA1YCR097W NTF2P33331 125 aaKnown RBP-0.54□□□□□ -2.5
HMRA1YCR097W ARP3P47117 449 aaKnown RBP-0.54□□□□□ -2.5
HMRA1YCR097W LIA1P47120 325 aaKnown RBP-0.54□□□□□ -2.5
HMRA1YCR097W PDR17P53844 350 aa-0.54□□□□□ -2.5
HMRA1YCR097W KEI1Q06346 221 aa-0.54□□□□□ -2.5
HMRA1YCR097W PAM18Q07914 168 aa-0.54□□□□□ -2.5
HMRA1YCR097W FAS1P07149 2051 aaKnown RBP-0.54□□□□□ -2.5
HMRA1YCR097W ERV25P54837 211 aaKnown RBP-0.55□□□□□ -2.5
HMRA1YCR097W HNT1Q04344 158 aaKnown RBP-0.55□□□□□ -2.5
HMRA1YCR097W YHR214C-EQ8TGK0 99 aa-0.55□□□□□ -2.5
HMRA1YCR097W YLR157W-EP0CF00 54 aa-0.56□□□□□ -2.5
HMRA1YCR097W STF2P16965 84 aa-0.56□□□□□ -2.5
HMRA1YCR097W SSO1P32867 290 aa-0.56□□□□□ -2.5
HMRA1YCR097W YKR070WP36151 352 aaKnown RBP-0.56□□□□□ -2.5
HMRA1YCR097W BRR6P53062 197 aa-0.56□□□□□ -2.5
HMRA1YCR097W YGR050CP53231 118 aa-0.56□□□□□ -2.5
HMRA1YCR097W YNL134CP53912 376 aaKnown RBP-0.56□□□□□ -2.5
HMRA1YCR097W SHH3Q04487 196 aa-0.56□□□□□ -2.5
HMRA1YCR097W YOL107WQ12239 342 aa-0.56□□□□□ -2.5
HMRA1YCR097W MED4Q12343 284 aa-0.56□□□□□ -2.5
HMRA1YCR097W RRP36Q12481 300 aaPredicted RBP-0.56□□□□□ -2.5
HMRA1YCR097W PHO85P17157 305 aa-0.57□□□□□ -2.5
HMRA1YCR097W MAG1P22134 296 aaKnown RBP-0.57□□□□□ -2.5
HMRA1YCR097W YCR023CP25351 611 aa-0.57□□□□□ -2.5
HMRA1YCR097W YCR090CP25654 182 aaKnown RBP-0.57□□□□□ -2.5
HMRA1YCR097W RPS29BP41058 56 aaKnown RBP-0.57□□□□□ -2.5
HMRA1YCR097W BNA6P43619 295 aa-0.57□□□□□ -2.5
HMRA1YCR097W YGL235WP53071 178 aa-0.57□□□□□ -2.5
HMRA1YCR097W NOP19P53317 196 aaPredicted RBP-0.57□□□□□ -2.5
HMRA1YCR097W RRP17Q04031 235 aaPredicted RBP-0.57□□□□□ -2.5
Retrieved 100 of 5,963 RNA–protein pairs in 68.9 ms