RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 UMODL1Q5DID0 1318 aa9.48□□□□□ -0.89
PHGDH-219ENST00000641513 CCDC66A2RUB6 948 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 MOXD2PA6NHM9 499 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 CES2O00748 559 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 RECQL4O94761 1208 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 ASS1P00966 412 aaKnown RBP9.47□□□□□ -0.89
PHGDH-219ENST00000641513 CALCAP01258 141 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 RPLP2P05387 115 aaKnown RBP9.47□□□□□ -0.89
PHGDH-219ENST00000641513 MMEP08473 750 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 CYP11B1P15538 503 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 ABCB4P21439 1286 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 AKAP5P24588 427 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 TNFRSF8P28908 595 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 POLR2BP30876 1174 aaKnown RBP9.47□□□□□ -0.89
PHGDH-219ENST00000641513 AARSP49588 968 aaKnown RBP eCLIP9.47□□□□□ -0.89
PHGDH-219ENST00000641513 GUCY2FP51841 1108 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 YWHAEP62258 255 aaKnown RBP9.47□□□□□ -0.89
PHGDH-219ENST00000641513 SMC1AQ14683 1233 aaKnown RBP9.47□□□□□ -0.89
PHGDH-219ENST00000641513 IFI16Q16666 785 aaKnown RBP9.47□□□□□ -0.89
PHGDH-219ENST00000641513 SCARA3Q6AZY7 606 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 TMEM270Q6UE05 265 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 SESTD1Q86VW0 696 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 FAM228AQ86W67 206 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 TMEM130Q8N3G9 435 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 MMGT1Q8N4V1 131 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 RBBP8NLQ8NC74 664 aaPredicted RBP9.47□□□□□ -0.89
PHGDH-219ENST00000641513 WNT8BQ93098 351 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 PKNOX2Q96KN3 472 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 NOX5Q96PH1 765 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 TSEN34Q9BSV6 310 aaKnown RBP9.47□□□□□ -0.89
PHGDH-219ENST00000641513 NIF3L1Q9GZT8 377 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.47□□□□□ -0.89
PHGDH-219ENST00000641513 ACP6Q9NPH0 428 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 STARD7Q9NQZ5 370 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 TRMT13Q9NUP7 481 aaKnown RBP9.47□□□□□ -0.89
PHGDH-219ENST00000641513 KLK14Q9P0G3 267 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 SNX12Q9UMY4 172 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 POLIQ9UNA4 740 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 ST3GAL5Q9UNP4 418 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 GRIN2DO15399 1336 aa9.47□□□□□ -0.89
PHGDH-219ENST00000641513 A0A1W2PQ45 241 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-219ENST00000641513 A0A1W2PQY0 241 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 ENC1O14682 589 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 TLR3O15455 904 aaKnown RBP9.46□□□□□ -0.9
PHGDH-219ENST00000641513 MEFVO15553 781 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-219ENST00000641513 THAP12O43422 761 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 SASH3O75995 380 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 CHRNA1P02708 482 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 WEE2P0C1S8 567 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 P4HA1P13674 534 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 CHRNB2P17787 502 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 GNA15P30679 374 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 GALCP54803 685 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 TNNC1P63316 161 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 RBP5P82980 135 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 CDR2Q01850 454 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 PTPN11Q06124 597 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-219ENST00000641513 PAK2Q13177 524 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 PTK7Q13308 1070 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 GLE1Q53GS7 698 aaKnown RBP9.46□□□□□ -0.9
PHGDH-219ENST00000641513 GLRA4Q5JXX5 417 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 LHX8Q68G74 356 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 NT5DC4Q86YG4 428 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 HACE1Q8IYU2 909 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 C1orf127Q8N9H9 656 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 BEST2Q8NFU1 509 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 SLC30A5Q8TAD4 765 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 EPS8L1Q8TE68 723 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 CTNNBL1Q8WYA6 563 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-219ENST00000641513 TAF4BQ92750 862 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 EXOC4Q96A65 974 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 HPDLQ96IR7 371 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 SNX27Q96L92 541 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 PNKPQ96T60 521 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 SENP6Q9GZR1 1112 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-219ENST00000641513 UNC93B1Q9H1C4 597 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 PLEKHA5Q9HAU0 1116 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 RNF19AQ9NV58 838 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 SIX4Q9UIU6 781 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 NOCTQ9UK39 431 aaKnown RBP9.46□□□□□ -0.9
PHGDH-219ENST00000641513 ITGA11Q9UKX5 1188 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 INTUQ9ULD6 942 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 DERAQ9Y315 318 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 C2CD2Q9Y426 696 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 HYOU1Q9Y4L1 999 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 IPPQ9Y573 584 aa9.46□□□□□ -0.9
PHGDH-219ENST00000641513 SCN5AQ14524 2016 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 A0A0U1RQG5 324 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-219ENST00000641513 GRID2IPA4D2P6 1211 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 GPR182O15218 404 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 XPOTO43592 962 aaKnown RBP9.45□□□□□ -0.9
PHGDH-219ENST00000641513 RTN2O75298 545 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 SEC31AO94979 1220 aaKnown RBP9.45□□□□□ -0.9
PHGDH-219ENST00000641513 FTLP02792 175 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-219ENST00000641513 ATP1A1P05023 1023 aaKnown RBP9.45□□□□□ -0.9
PHGDH-219ENST00000641513 TMEM253P0C7T8 217 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 GHRP10912 638 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 ITGA4P13612 1032 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 HSPA6P17066 643 aa9.45□□□□□ -0.9
PHGDH-219ENST00000641513 ACO1P21399 889 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms