RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 CCDC83Q8IWF9 413 aa16.39■□□□□ 0.21
SYNE2-228ENST00000639659 ZNF687Q8N1G0 1237 aa16.39■□□□□ 0.21
SYNE2-228ENST00000639659 SHKBP1Q8TBC3 707 aa16.39■□□□□ 0.21
SYNE2-228ENST00000639659 NETO1Q8TDF5 533 aa16.39■□□□□ 0.21
SYNE2-228ENST00000639659 IER2Q9BTL4 223 aa16.39■□□□□ 0.21
SYNE2-228ENST00000639659 RUSC1Q9BVN2 902 aa16.39■□□□□ 0.21
SYNE2-228ENST00000639659 PTPRHQ9HD43 1115 aa16.39■□□□□ 0.21
SYNE2-228ENST00000639659 SEMA4GQ9NTN9 838 aa16.39■□□□□ 0.21
SYNE2-228ENST00000639659 CNTN3Q9P232 1028 aa16.39■□□□□ 0.21
SYNE2-228ENST00000639659 NOL7Q9UMY1 257 aaKnown RBP16.39■□□□□ 0.21
SYNE2-228ENST00000639659 EPG5Q9HCE0 2579 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 RALGAPA1Q6GYQ0 2036 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 MICAL2O94851 1124 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 RETP07949 1114 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 CHRNB1P11230 501 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 MUTP22033 750 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 CDR1P51861 262 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 YWHAHQ04917 246 aaPredicted RBP16.38■□□□□ 0.21
SYNE2-228ENST00000639659 MRPL58Q14197 206 aaKnown RBP16.38■□□□□ 0.21
SYNE2-228ENST00000639659 GAS6Q14393 721 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 NOLC1Q14978 699 aaKnown RBP eCLIP16.38■□□□□ 0.21
SYNE2-228ENST00000639659 ST3GAL2Q16842 350 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 STXBP5Q5T5C0 1151 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 Q6ZS52 159 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 USP37Q86T82 979 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 MFSD6LQ8IWD5 586 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 LEMD2Q8NC56 503 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 RSPRY1Q96DX4 576 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 ZFYVE19Q96K21 471 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 DRC1Q96MC2 740 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 TMEM134Q9H6X4 195 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 PCDHB8Q9UN66 801 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 DNM3Q9UQ16 869 aa16.38■□□□□ 0.21
SYNE2-228ENST00000639659 DPYSL4O14531 572 aa16.37■□□□□ 0.21
SYNE2-228ENST00000639659 ADRB1P08588 477 aa16.37■□□□□ 0.21
SYNE2-228ENST00000639659 CXCL8P10145 99 aa16.37■□□□□ 0.21
SYNE2-228ENST00000639659 FXR2P51116 673 aaKnown RBP eCLIP16.37■□□□□ 0.213e-6■■■■□ 25.3
SYNE2-228ENST00000639659 EPHB3P54753 998 aa16.37■□□□□ 0.21
SYNE2-228ENST00000639659 ORC2Q13416 577 aaPredicted RBP16.37■□□□□ 0.21
SYNE2-228ENST00000639659 DSTYKQ6XUX3 929 aa16.37■□□□□ 0.21
SYNE2-228ENST00000639659 PRR23CQ6ZRP0 262 aa16.37■□□□□ 0.21
SYNE2-228ENST00000639659 DAW1Q8N136 415 aa16.37■□□□□ 0.21
SYNE2-228ENST00000639659 BICD1Q96G01 975 aa16.37■□□□□ 0.21
SYNE2-228ENST00000639659 RAB34Q9BZG1 259 aa16.37■□□□□ 0.21
SYNE2-228ENST00000639659 ARHGAP28Q9P2N2 729 aa16.37■□□□□ 0.21
SYNE2-228ENST00000639659 ACACBO00763 2458 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 MEFVO15553 781 aaPredicted RBP16.36■□□□□ 0.21
SYNE2-228ENST00000639659 HRO43593 1189 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 GDF9O60383 454 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 CDC25AP30304 524 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 ALDH1A3P47895 512 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 DUSP4Q13115 394 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 PTGDRQ13258 359 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 PLD1Q13393 1074 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 PON2Q15165 354 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 SLC10A6Q3KNW5 377 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 KRT79Q5XKE5 535 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 SPEM1Q8N4L4 309 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 FAM184AQ8NB25 1140 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 KIF12Q96FN5 646 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 FOXP1Q9H334 677 aaPredicted RBP16.36■□□□□ 0.21
SYNE2-228ENST00000639659 TRPV5Q9NQA5 729 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 SLC27A5Q9Y2P5 690 aa16.36■□□□□ 0.21
SYNE2-228ENST00000639659 RBM19Q9Y4C8 960 aaKnown RBP16.36■□□□□ 0.21
SYNE2-228ENST00000639659 SPECC1L-ADORA2AF8WAN1 911 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 ABLIM1O14639 778 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 SLC30A4O14863 429 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 SOAT2O75908 522 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 PROZP22891 400 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 HOXC13P31276 330 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 GUCY2FP51841 1108 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 EPHA5P54756 1037 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 MAPK7Q13164 816 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 CCDC6Q16204 474 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 AASDHQ4L235 1098 aaPredicted RBP16.35■□□□□ 0.21
SYNE2-228ENST00000639659 RINT1Q6NUQ1 792 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 TXNDC11Q6PKC3 985 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 LONP2Q86WA8 852 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 ARID3BQ8IVW6 561 aaPredicted RBP16.35■□□□□ 0.21
SYNE2-228ENST00000639659 E2F7Q96AV8 911 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 PLIN2Q99541 437 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 GPR88Q9GZN0 384 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 CRISPLD1Q9H336 500 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 ATXN3LQ9H3M9 355 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 C8orf33Q9H7E9 229 aaPredicted RBP16.35■□□□□ 0.21
SYNE2-228ENST00000639659 TRPV4Q9HBA0 871 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 GTSE1Q9NYZ3 720 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 DAXXQ9UER7 740 aaPredicted RBP16.35■□□□□ 0.21
SYNE2-228ENST00000639659 MYH11P35749 1972 aa16.35■□□□□ 0.21
SYNE2-228ENST00000639659 ARNTLO00327 626 aa16.34■□□□□ 0.21
SYNE2-228ENST00000639659 CHADO15335 359 aa16.34■□□□□ 0.21
SYNE2-228ENST00000639659 CLDN3O15551 220 aa16.34■□□□□ 0.21
SYNE2-228ENST00000639659 TOM1L1O75674 476 aa16.34■□□□□ 0.21
SYNE2-228ENST00000639659 CTHP32929 405 aa16.34■□□□□ 0.21
SYNE2-228ENST00000639659 CSRP2Q16527 193 aa16.34■□□□□ 0.21
SYNE2-228ENST00000639659 GPR158Q5T848 1215 aa16.34■□□□□ 0.21
SYNE2-228ENST00000639659 KCNK18Q7Z418 384 aa16.34■□□□□ 0.21
SYNE2-228ENST00000639659 HAUS6Q7Z4H7 955 aa16.34■□□□□ 0.21
SYNE2-228ENST00000639659 TMC8Q8IU68 726 aa16.34■□□□□ 0.21
SYNE2-228ENST00000639659 FAM160A2Q8N612 972 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms