RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 SPTLC3Q9NUV7 552 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 FBXO34Q9NWN3 711 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 TUBD1Q9UJT1 453 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 TRAF6Q9Y4K3 522 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 PAXBP1Q9Y5B6 917 aa0.44□□□□□ -2.34
CCDC7-215ENST00000639629 PRAMEF33A0A0G2JMD5 474 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 A0A1B0GTW7 788 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 SYNCRIPO60506 623 aaKnown RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 PRAMEF10O60809 474 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ITGA10O75578 1167 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ABLIM3O94929 683 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ZNF37AP17032 561 aaPredicted RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 RPL17P18621 184 aaKnown RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 HIBADHP31937 336 aaKnown RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 GRIA3P42263 894 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 MAPK10P53779 464 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 EGR4Q05215 589 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 DDB1Q16531 1140 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ATAT1Q5SQI0 421 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 LCE3EQ5T5B0 92 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ANKS6Q68DC2 871 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 BHLHA9Q7RTU4 235 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 C1orf162Q8NEQ5 155 aaPredicted RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 TRIM58Q8NG06 486 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 SREK1Q8WXA9 508 aaKnown RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 TEX101Q9BY14 249 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 MTG2Q9H4K7 406 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 DDX21Q9NR30 783 aaKnown RBP eCLIP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ZBTB40Q9NUA8 1239 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 MDFICQ9P1T7 246 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ANKFY1Q9P2R3 1169 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 SYNPO2Q9UMS6 1093 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 SRRM3A6NNA2 597 aaPredicted RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 HTRA2O43464 458 aaPredicted RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 RAMP2O60895 175 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ABHD16AO95870 558 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ANOS1P23352 680 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 IRF9Q00978 393 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 TARDBPQ13148 414 aaKnown RBP eCLIP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ELAVL1Q15717 326 aaKnown RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 KRTAP13-3Q3SY46 172 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 PRAMEF14Q5SWL7 426 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 C10orf25Q5T742 122 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 SFRP4Q6FHJ7 346 aaPredicted RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 CATSPERGQ6ZRH7 1159 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 C18orf65Q6ZTR6 163 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 HOMER1Q86YM7 354 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ZNF276Q8N554 614 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 DDX51Q8N8A6 666 aaKnown RBP eCLIP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 EID2BQ96D98 161 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 PBKQ96KB5 322 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ALG8Q9BVK2 526 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 SPATA5L1Q9BVQ7 753 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 GPR87Q9BY21 358 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 GALNT9Q9HCQ5 603 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 WASHC2CQ9Y4E1 1318 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 CLCA1A8K7I4 914 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 CAPN14A8MX76 684 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ZNF814B7Z6K7 855 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 DCLK1O15075 740 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 INSIG1O15503 277 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 SMAD6O43541 496 aaKnown RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ENDOD1O94919 500 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 C1RP00736 705 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 CYP1A1P04798 512 aaPredicted RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 KRTAP1-4P0C5Y4 121 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 CDK4P11802 303 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 MTHFD2P13995 350 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 GNLYP22749 145 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 CERS1P27544 350 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 PCSK1P29120 753 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 GLIPR1P48060 266 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 HK3P52790 923 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 KRTAP10-8P60410 259 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 OCRLQ01968 901 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 EFR3AQ14156 821 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ERV3-1Q14264 604 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 TXNRD1Q16881 649 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 FLYWCH1Q4VC44 716 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 PDZD4Q76G19 769 aaPredicted RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ADAT2Q7Z6V5 191 aaKnown RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 JAZF1Q86VZ6 243 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 RBM12BQ8IXT5 1001 aaKnown RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 CHPFQ8IZ52 775 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ADCY4Q8NFM4 1077 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 MAGEB10Q96LZ2 347 aaPredicted RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 TRIB1Q96RU8 372 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 TARS2Q9BW92 718 aaKnown RBP0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ANO3Q9BYT9 981 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 WDR11Q9BZH6 1224 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 RNPEPQ9H4A4 650 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 GJB4Q9NTQ9 266 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 NCKIPSDQ9NZQ3 722 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 LIMCH1Q9UPQ0 1083 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 PCDHB1Q9Y5F3 818 aa0.43□□□□□ -2.34
CCDC7-215ENST00000639629 ESYT3A0FGR9 886 aa0.42□□□□□ -2.34
CCDC7-215ENST00000639629 TISP43B9A030 160 aa0.42□□□□□ -2.34
CCDC7-215ENST00000639629 MEIS1O00470 390 aa0.42□□□□□ -2.34
CCDC7-215ENST00000639629 TP73O15350 636 aa0.42□□□□□ -2.34
CCDC7-215ENST00000639629 STC2O76061 302 aa0.42□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms