RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 LPIN2Q92539 896 aa4.79□□□□□ -1.64
CCDC7-211ENST00000638889 ZNF778Q96MU6 729 aa4.79□□□□□ -1.64
CCDC7-211ENST00000638889 TLR10Q9BXR5 811 aa4.79□□□□□ -1.64
CCDC7-211ENST00000638889 JKAMPQ9P055 326 aa4.79□□□□□ -1.64
CCDC7-211ENST00000638889 SAP30BPQ9UHR5 308 aaKnown RBP4.79□□□□□ -1.64
CCDC7-211ENST00000638889 ADM5C9JUS6 153 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 E7ENX8 843 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 SUN1O94901 812 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 HSD3B2P26439 372 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 ITPKBP27987 946 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 MASP1P48740 699 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 ERVK-21P61565 698 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 TAP2Q03519 686 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 ITIH3Q06033 890 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 PIGFQ07326 219 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 UTP14CQ5TAP6 766 aaKnown RBP4.78□□□□□ -1.64
CCDC7-211ENST00000638889 Q8N9P0 234 aaPredicted RBP4.78□□□□□ -1.64
CCDC7-211ENST00000638889 TOR1AIP2Q8NFQ8 470 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 WDR66Q8TBY9 1149 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 NRG4Q8WWG1 115 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 SNX19Q92543 992 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 DPF1Q92782 380 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 DPF2Q92785 391 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 FLRT1Q9NZU1 646 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 CDYLQ9Y232 598 aa4.78□□□□□ -1.64
CCDC7-211ENST00000638889 AOX1Q06278 1338 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 CCDC195A0A1B0GUA6 201 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 WDR27A2RRH5 827 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 MANSC4A6NHS7 340 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-211ENST00000638889 TRIM75PA6NK02 468 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 GRM6O15303 877 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 ELFN1P0C7U0 828 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 CTGFP29279 349 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 POU6F2P78424 691 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-211ENST00000638889 CDC42EP1Q00587 391 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 TXNRD1Q16881 649 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 FAM153CQ494X1 144 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 CD300EQ496F6 205 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-211ENST00000638889 LCE1AQ5T7P2 110 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 RNF219Q5W0B1 726 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-211ENST00000638889 ZNF425Q6IV72 752 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 KRT26Q7Z3Y9 468 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 TMPRSS9Q7Z410 1059 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 RSPH3Q86UC2 560 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 AMOTL1Q8IY63 956 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 ADGRG5Q8IZF4 528 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 MYCBPAPQ8TBZ2 947 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 KLC4Q9NSK0 619 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 TDP1Q9NUW8 608 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 VSX1Q9NZR4 365 aaPredicted RBP4.77□□□□□ -1.65
CCDC7-211ENST00000638889 INTUQ9ULD6 942 aa4.77□□□□□ -1.65
CCDC7-211ENST00000638889 WDR91A4D1P6 747 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 SGTAO43765 313 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 SLC43A1O75387 559 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 SLC10A2Q12908 348 aaPredicted RBP4.76□□□□□ -1.65
CCDC7-211ENST00000638889 TARDBPQ13148 414 aaKnown RBP eCLIP4.76□□□□□ -1.65
CCDC7-211ENST00000638889 MAPK7Q13164 816 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 KLF1Q13351 362 aaPredicted RBP4.76□□□□□ -1.65
CCDC7-211ENST00000638889 EZH2Q15910 746 aaKnown RBP4.76□□□□□ -1.65
CCDC7-211ENST00000638889 SRSF7Q16629 238 aaKnown RBP eCLIP4.76□□□□□ -1.65
CCDC7-211ENST00000638889 PREPLQ4J6C6 727 aaPredicted RBP4.76□□□□□ -1.65
CCDC7-211ENST00000638889 TSHZ1Q6ZSZ6 1077 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 LHFPL2Q6ZUX7 228 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 ZNF365Q70YC5 407 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 MIGA2Q7L4E1 593 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 CFAP52Q8N1V2 620 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 AOPEPQ8N6M6 819 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 C9orf106Q8NAJ2 232 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 SEMA6DQ8NFY4 1073 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 TMX3Q96JJ7 454 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 KLHL32Q96NJ5 620 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 SLC2A13Q96QE2 648 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 HAPLN3Q96S86 360 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 PACSIN1Q9BY11 444 aa4.76□□□□□ -1.65
CCDC7-211ENST00000638889 TLDC2A0PJX2 215 aa4.75□□□□□ -1.65
CCDC7-211ENST00000638889 LINC00473A8K010 186 aa4.75□□□□□ -1.65
CCDC7-211ENST00000638889 TOR1BO14657 336 aa4.75□□□□□ -1.65
CCDC7-211ENST00000638889 ANXA1P04083 346 aa4.75□□□□□ -1.65
CCDC7-211ENST00000638889 CHRM2P08172 466 aa4.75□□□□□ -1.65
CCDC7-211ENST00000638889 SBK3P0C264 359 aa4.75□□□□□ -1.65
CCDC7-211ENST00000638889 RAB39AQ14964 217 aa4.75□□□□□ -1.65
CCDC7-211ENST00000638889 LLGL1Q15334 1064 aa4.75□□□□□ -1.65
CCDC7-211ENST00000638889 B3GALNT2Q8NCR0 500 aa4.75□□□□□ -1.65
CCDC7-211ENST00000638889 IFI44Q8TCB0 444 aa4.75□□□□□ -1.65
CCDC7-211ENST00000638889 HDAC10Q969S8 669 aa4.75□□□□□ -1.65
CCDC7-211ENST00000638889 ADAM21Q9UKJ8 722 aa4.75□□□□□ -1.65
CCDC7-211ENST00000638889 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.75□□□□□ -1.65
CCDC7-211ENST00000638889 ZNF804BA4D1E1 1349 aa4.74□□□□□ -1.65
CCDC7-211ENST00000638889 SPATA31A3Q5VYP0 1347 aa4.74□□□□□ -1.65
CCDC7-211ENST00000638889 LINC01548A6NM66 108 aa4.74□□□□□ -1.65
CCDC7-211ENST00000638889 URI1O94763 535 aaPredicted RBP4.74□□□□□ -1.65
CCDC7-211ENST00000638889 VIL1P09327 827 aaKnown RBP4.74□□□□□ -1.65
CCDC7-211ENST00000638889 PPP3CBP16298 524 aa4.74□□□□□ -1.65
CCDC7-211ENST00000638889 KRTAP10-9P60411 292 aa4.74□□□□□ -1.65
CCDC7-211ENST00000638889 SSBP2P81877 361 aaPredicted RBP4.74□□□□□ -1.65
CCDC7-211ENST00000638889 EXOSC10Q01780 885 aaKnown RBP4.74□□□□□ -1.65
CCDC7-211ENST00000638889 SUMO4Q6EEV6 95 aa4.74□□□□□ -1.65
CCDC7-211ENST00000638889 AMIGO2Q86SJ2 522 aa4.74□□□□□ -1.65
CCDC7-211ENST00000638889 PPM1NQ8N819 430 aa4.74□□□□□ -1.65
CCDC7-211ENST00000638889 ZNF366Q8N895 744 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms