RNA–Protein interactions for RNA: ENST00000638663.1

SCARB2-212, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-212ENST00000638663 CFHP08603 1231 aa23.19■■□□□ 1.3
SCARB2-212ENST00000638663 SSTR3P32745 418 aaPredicted RBP23.19■■□□□ 1.3
SCARB2-212ENST00000638663 THPOP40225 353 aa23.19■■□□□ 1.3
SCARB2-212ENST00000638663 DNA2P51530 1060 aa23.19■■□□□ 1.3
SCARB2-212ENST00000638663 RBP5P82980 135 aa23.19■■□□□ 1.3
SCARB2-212ENST00000638663 GLRA4Q5JXX5 417 aa23.19■■□□□ 1.3
SCARB2-212ENST00000638663 UBXN4Q92575 508 aa23.19■■□□□ 1.3
SCARB2-212ENST00000638663 OSBPL9Q96SU4 736 aa23.19■■□□□ 1.3
SCARB2-212ENST00000638663 KLK14Q9P0G3 267 aa23.19■■□□□ 1.3
SCARB2-212ENST00000638663 PARP2Q9UGN5 583 aa23.19■■□□□ 1.3
SCARB2-212ENST00000638663 TSKSQ9UJT2 592 aa23.19■■□□□ 1.3
SCARB2-212ENST00000638663 COG5Q9UP83 839 aa23.19■■□□□ 1.3
SCARB2-212ENST00000638663 DERAQ9Y315 318 aa23.19■■□□□ 1.3
SCARB2-212ENST00000638663 TRIP11Q15643 1979 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 ATMINO43313 823 aaPredicted RBP23.18■■□□□ 1.3
SCARB2-212ENST00000638663 UNGP13051 313 aaPredicted RBP23.18■■□□□ 1.3
SCARB2-212ENST00000638663 GRK4P32298 578 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 CXCR5P32302 372 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 NFX1Q12986 1120 aaKnown RBP23.18■■□□□ 1.3
SCARB2-212ENST00000638663 PTPROQ16827 1216 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 ALKAL1Q6UXT8 129 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 COG1Q8WTW3 980 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 BCO2Q9BYV7 579 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 HMX1Q9NP08 348 aaPredicted RBP23.18■■□□□ 1.3
SCARB2-212ENST00000638663 SAGE1Q9NXZ1 904 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 CTTNBP2NLQ9P2B4 639 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 CHORDC1Q9UHD1 332 aaPredicted RBP23.18■■□□□ 1.3
SCARB2-212ENST00000638663 ST3GAL5Q9UNP4 418 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 CABYRO75952 493 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 PRLRP16471 622 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 CDH8P55286 799 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 YWHAEP62258 255 aaKnown RBP23.18■■□□□ 1.3
SCARB2-212ENST00000638663 MGAT3Q09327 533 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 DAAM2Q86T65 1068 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 RPAINQ86UA6 219 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 PASD1Q8IV76 773 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 RHOT2Q8IXI1 618 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 CPA5Q8WXQ8 436 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 CYFIP2Q96F07 1278 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 SDCBP2Q9H190 292 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 SMYD3Q9H7B4 428 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 VRTNQ9H8Y1 702 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 TRMT13Q9NUP7 481 aaKnown RBP23.18■■□□□ 1.3
SCARB2-212ENST00000638663 CNTN3Q9P232 1028 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 TUBGCP4Q9UGJ1 667 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 IPPQ9Y573 584 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 PTCH2Q9Y6C5 1203 aa23.18■■□□□ 1.3
SCARB2-212ENST00000638663 RALGAPA2Q2PPJ7 1873 aa23.17■■□□□ 1.3
SCARB2-212ENST00000638663 CYP1A1P04798 512 aaPredicted RBP23.17■■□□□ 1.3
SCARB2-212ENST00000638663 TCP1P17987 556 aaKnown RBP23.17■■□□□ 1.3
SCARB2-212ENST00000638663 TEX35Q5T0J7 233 aa23.17■■□□□ 1.3
SCARB2-212ENST00000638663 NAA35Q5VZE5 725 aa23.17■■□□□ 1.3
SCARB2-212ENST00000638663 LHX8Q68G74 356 aa23.17■■□□□ 1.3
SCARB2-212ENST00000638663 SMG8Q8ND04 991 aaKnown RBP23.17■■□□□ 1.3
SCARB2-212ENST00000638663 ZNF606Q8WXB4 792 aa23.17■■□□□ 1.3
SCARB2-212ENST00000638663 C18orf25Q96B23 403 aaPredicted RBP23.17■■□□□ 1.3
SCARB2-212ENST00000638663 ZNF653Q96CK0 615 aa23.17■■□□□ 1.3
SCARB2-212ENST00000638663 NOD1Q9Y239 953 aa23.17■■□□□ 1.3
SCARB2-212ENST00000638663 CTAGE15A4D2H0 777 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 BUB1BO60566 1050 aaPredicted RBP23.16■■□□□ 1.3
SCARB2-212ENST00000638663 RPLP2P05387 115 aaKnown RBP23.16■■□□□ 1.3
SCARB2-212ENST00000638663 CTAGE8P0CG41 777 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 ZBTB6Q15916 424 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 CTAGE6Q86UF2 777 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 CTAGE4Q8IX94 777 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 CAGE1Q8TC20 777 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 GOLGA1Q92805 767 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 MMS19Q96T76 1030 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 TRIM17Q9Y577 477 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 DNAH12Q6ZR08 3092 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 BRD2P25440 801 aaKnown RBP23.16■■□□□ 1.3
SCARB2-212ENST00000638663 PRMT2P55345 433 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 RSRC2Q7L4I2 434 aaKnown RBP23.16■■□□□ 1.3
SCARB2-212ENST00000638663 SLFN11Q7Z7L1 901 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 SYCE1Q8N0S2 351 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 BEST2Q8NFU1 509 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 FAXDC2Q96IV6 333 aa23.16■■□□□ 1.3
SCARB2-212ENST00000638663 P4HA1P13674 534 aa23.15■■□□□ 1.3
SCARB2-212ENST00000638663 TRIM72Q6ZMU5 477 aa23.15■■□□□ 1.3
SCARB2-212ENST00000638663 PEX26Q7Z412 305 aa23.15■■□□□ 1.3
SCARB2-212ENST00000638663 CREG2Q8IUH2 290 aa23.15■■□□□ 1.3
SCARB2-212ENST00000638663 GLT1D1Q96MS3 346 aa23.15■■□□□ 1.3
SCARB2-212ENST00000638663 OSBPL7Q9BZF2 842 aa23.15■■□□□ 1.3
SCARB2-212ENST00000638663 GTF3C4Q9UKN8 822 aa23.15■■□□□ 1.3
SCARB2-212ENST00000638663 SMIM28A0A1B0GU29 152 aa23.14■■□□□ 1.3
SCARB2-212ENST00000638663 MOXD2PA6NHM9 499 aa23.14■■□□□ 1.3
SCARB2-212ENST00000638663 PDE2AO00408 941 aaPredicted RBP23.14■■□□□ 1.3
SCARB2-212ENST00000638663 PPEF2O14830 753 aa23.14■■□□□ 1.3
SCARB2-212ENST00000638663 CYP1A2P05177 515 aa23.14■■□□□ 1.3
SCARB2-212ENST00000638663 NSFP46459 744 aaKnown RBP23.14■■□□□ 1.3
SCARB2-212ENST00000638663 NOMO3P69849 1222 aa23.14■■□□□ 1.3
SCARB2-212ENST00000638663 CKAP4Q07065 602 aaKnown RBP23.14■■□□□ 1.3
SCARB2-212ENST00000638663 PTK7Q13308 1070 aa23.14■■□□□ 1.3
SCARB2-212ENST00000638663 TCEAL1Q15170 157 aa23.14■■□□□ 1.3
SCARB2-212ENST00000638663 RPS6KA1Q15418 735 aa23.14■■□□□ 1.3
SCARB2-212ENST00000638663 ARRDC4Q8NCT1 418 aa23.14■■□□□ 1.3
SCARB2-212ENST00000638663 ZSWIM1Q9BR11 485 aa23.14■■□□□ 1.3
SCARB2-212ENST00000638663 AGO3Q9H9G7 860 aaKnown RBP23.14■■□□□ 1.3
SCARB2-212ENST00000638663 STAU1O95793 577 aaKnown RBP23.14■■□□□ 1.29
SCARB2-212ENST00000638663 TNNC1P63316 161 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms