RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 TPI1P60174 286 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 HABP4Q5JVS0 413 aaKnown RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 GNASQ5JWF2 1037 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 OTOP1Q7RTM1 612 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 GTSE1Q9NYZ3 720 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 KLK14Q9P0G3 267 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 H2AFXP16104 143 aaPredicted RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 SULT1E1P49888 294 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 MDM2Q00987 491 aaPredicted RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 IL1RL1Q01638 556 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 KCNA1Q09470 495 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 PAPD7Q5XG87 772 aaKnown RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 TRMT10CQ7L0Y3 403 aaKnown RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 FAM83AQ86UY5 434 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 CDC26Q8NHZ8 85 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 HNRNPLLQ8WVV9 542 aaKnown RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 RAPGEF5Q92565 580 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 ZSWIM1Q9BR11 485 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 ZBED2Q9BTP6 218 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 ZBTB24O43167 697 aaPredicted RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 COILP38432 576 aaPredicted RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 PLA2G4AP47712 749 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 IRAK1P51617 712 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 ACTN3Q08043 901 aaPredicted RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 SLC47A2Q86VL8 602 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 CEP120Q8N960 986 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 CASKIN2Q8WXE0 1202 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 IFT43Q96FT9 208 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 AGO4Q9HCK5 861 aaKnown RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 LRRC4BQ9NT99 713 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 PAPOLAP51003 745 aaKnown RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 PRAMEP78395 509 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 DCAF6Q58WW2 860 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 KCNT1Q5JUK3 1230 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 PCNX4Q63HM2 1172 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 URGCPQ8TCY9 931 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 ALKBH8Q96BT7 664 aaKnown RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 CYFIP2Q96F07 1278 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 VCX3AQ9NNX9 186 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 SARS2Q9NP81 518 aaKnown RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 METTL5Q9NRN9 209 aaKnown RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 ZC3H7BQ9UGR2 993 aaKnown RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 TPX2Q9ULW0 747 aaKnown RBP15.1■□□□□ 0.01
SCARB2-208ENST00000638372 L1RE1Q9UN81 338 aa15.1■□□□□ 0.01
SCARB2-208ENST00000638372 KDM4FA0A1W2PPD8 638 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 EIF3HO15372 352 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCARB2-208ENST00000638372 LSP1P33241 339 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 STILQ15468 1287 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 GRAMD1BQ3KR37 738 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 LRP10Q7Z4F1 713 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 SH3RF1Q7Z6J0 888 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 C4orf19Q8IY42 314 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 PDZD8Q8NEN9 1154 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 PARK7Q99497 189 aaKnown RBP15.09■□□□□ 0.01
SCARB2-208ENST00000638372 IL18RAPO95256 599 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 NPTXRO95502 500 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 LAMC2Q13753 1193 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 SYDE1Q6ZW31 735 aaPredicted RBP15.09■□□□□ 0.01
SCARB2-208ENST00000638372 USP33Q8TEY7 942 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 EPAS1Q99814 870 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.09■□□□□ 0.01
SCARB2-208ENST00000638372 FER1L4A9Z1Z3 1794 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 SPECC1L-ADORA2AF8WAN1 911 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 WNT7AO00755 349 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 KRT10P13645 584 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 HSD17B3P37058 310 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 MAGEA4P43358 317 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 HSD17B4P51659 736 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 MAPK7Q13164 816 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 ITPRIPL1Q6GPH6 555 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 C3orf62Q6ZUJ4 267 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 ZNF677Q86XU0 584 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 FBXO41Q8TF61 875 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 SLC35C1Q96A29 364 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 EPN3Q9H201 632 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 PRKAG2Q9UGJ0 569 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 XPO7Q9UIA9 1087 aaKnown RBP15.09■□□□□ 0.01
SCARB2-208ENST00000638372 PPP1R12AO14974 1030 aaPredicted RBP15.09■□□□□ 0.01
SCARB2-208ENST00000638372 RPS6KA5O75582 802 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 ATXN8OSP0DMR3 200 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 GRIK1P39086 918 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 PLEKHA5Q9HAU0 1116 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 SP110Q9HB58 689 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 FAM198AQ9UFP1 575 aa15.09■□□□□ 0.01
SCARB2-208ENST00000638372 LRRIQ3A6PVS8 624 aaPredicted RBP15.08■□□□□ 0.01
SCARB2-208ENST00000638372 KPNA7A9QM74 516 aa15.08■□□□□ 0.01
SCARB2-208ENST00000638372 APOEP02649 317 aa15.08■□□□□ 0.01
SCARB2-208ENST00000638372 NSUN2Q08J23 767 aaKnown RBP eCLIP15.08■□□□□ 0.01
SCARB2-208ENST00000638372 KIZQ2M2Z5 673 aa15.08■□□□□ 0.01
SCARB2-208ENST00000638372 MDM1Q8TC05 714 aa15.08■□□□□ 0.01
SCARB2-208ENST00000638372 SDCCAG3Q96C92 435 aa15.08■□□□□ 0.01
SCARB2-208ENST00000638372 ARHGEF26Q96DR7 871 aa15.08■□□□□ 0.01
SCARB2-208ENST00000638372 LUC7L3O95232 432 aaKnown RBP15.08■□□□□ 0
SCARB2-208ENST00000638372 TAC1P20366 129 aa15.08■□□□□ 0
SCARB2-208ENST00000638372 MUTP22033 750 aa15.08■□□□□ 0
SCARB2-208ENST00000638372 YWHAHQ04917 246 aaPredicted RBP15.08■□□□□ 0
SCARB2-208ENST00000638372 TBX2Q13207 712 aaPredicted RBP15.08■□□□□ 0
SCARB2-208ENST00000638372 PGM5Q15124 567 aa15.08■□□□□ 0
SCARB2-208ENST00000638372 ZNF473Q8WTR7 871 aaKnown RBP15.08■□□□□ 0
SCARB2-208ENST00000638372 FGD4Q96M96 766 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms