RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 YARSP54577 528 aaKnown RBP8.53□□□□□ -1.04
PNKP-229ENST00000637897 GPC5P78333 572 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 CREMQ03060 361 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 STRN3Q13033 797 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 FZD5Q13467 585 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 UVSSAQ2YD98 709 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 ZSCAN23Q3MJ62 389 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 FOXD4L6Q3SYB3 417 aaPredicted RBP8.53□□□□□ -1.04
PNKP-229ENST00000637897 PPM1LQ5SGD2 360 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 SPATA1Q5VX52 437 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 ASTLQ6HA08 431 aaPredicted RBP8.53□□□□□ -1.04
PNKP-229ENST00000637897 JADE1Q6IE81 842 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 FOXD4L3Q6VB84 417 aaPredicted RBP8.53□□□□□ -1.04
PNKP-229ENST00000637897 RNF19BQ6ZMZ0 732 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 ANKS3Q6ZW76 656 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 SIX5Q8N196 739 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 LINC00301Q8NCQ3 95 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 OR10T2Q8NGX3 314 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 ING5Q8WYH8 240 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 STAMQ92783 540 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 HPS3Q969F9 1004 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 RSPRY1Q96DX4 576 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 CDK5RAP3Q96JB5 506 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 ZSWIM3Q96MP5 696 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 PLEKHA5Q9HAU0 1116 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 TOPORSQ9NS56 1045 aaPredicted RBP8.53□□□□□ -1.04
PNKP-229ENST00000637897 SLC38A7Q9NVC3 462 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 LARSQ9P2J5 1176 aaKnown RBP8.53□□□□□ -1.04
PNKP-229ENST00000637897 CFAP45Q9UL16 551 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 CDH7Q9ULB5 785 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 FAM186AA6NE01 2351 aa8.53□□□□□ -1.04
PNKP-229ENST00000637897 DCHS1Q96JQ0 3298 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 BMP15O95972 392 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 SRFP11831 508 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 AOC1P19801 751 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 CYP3A5P20815 502 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 CLCN5P51795 746 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 LILRA4P59901 499 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 CCDC142Q17RM4 750 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 C9orf57Q5W0N0 161 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 TANGO2Q6ICL3 276 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 SHC4Q6S5L8 630 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 LRRTM3Q86VH5 581 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 TMC8Q8IU68 726 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 SUGP1Q8IWZ8 645 aaKnown RBP8.52□□□□□ -1.05
PNKP-229ENST00000637897 TCEAL8Q8IYN2 117 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 MAML2Q8IZL2 1156 aaPredicted RBP8.52□□□□□ -1.05
PNKP-229ENST00000637897 ZNF687Q8N1G0 1237 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 KIF12Q96FN5 646 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 CALML4Q96GE6 196 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 ZNF396Q96N95 335 aaPredicted RBP8.52□□□□□ -1.05
PNKP-229ENST00000637897 LRRC3BQ96PB8 259 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 MKNK1Q9BUB5 465 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 GRPEL1Q9HAV7 217 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 PIDD1Q9HB75 910 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 GDPD2Q9HCC8 539 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 AVENQ9NQS1 362 aaPredicted RBP8.52□□□□□ -1.05
PNKP-229ENST00000637897 SLC2A4RGQ9NR83 387 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.52□□□□□ -1.05
PNKP-229ENST00000637897 TBC1D7Q9P0N9 293 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 TFIP11Q9UBB9 837 aaKnown RBP8.52□□□□□ -1.05
PNKP-229ENST00000637897 WNT16Q9UBV4 365 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 CA14Q9ULX7 337 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 PCDHB8Q9UN66 801 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 MTF2Q9Y483 593 aaPredicted RBP8.52□□□□□ -1.05
PNKP-229ENST00000637897 INSL5Q9Y5Q6 135 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 GVINP1Q7Z2Y8 2422 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 PTPRJQ12913 1337 aa8.52□□□□□ -1.05
PNKP-229ENST00000637897 EP300Q09472 2414 aaPredicted RBP8.51□□□□□ -1.05
PNKP-229ENST00000637897 GOLGA6L4A6NEF3 574 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 SPDYE4A6NLX3 237 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 HNRNPDLO14979 420 aaKnown RBP8.51□□□□□ -1.05
PNKP-229ENST00000637897 GADD45BO75293 160 aaPredicted RBP8.51□□□□□ -1.05
PNKP-229ENST00000637897 SOAT2O75908 522 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 GJA1P17302 382 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 CASP1P29466 404 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 LIG4P49917 911 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 EPHA5P54756 1037 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 PTPN5P54829 565 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 ARPP19P56211 112 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 EHHADHQ08426 723 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 ADCY1Q08828 1119 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 CTXN3Q4LDR2 81 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 PABPC1LQ4VXU2 614 aaKnown RBP8.51□□□□□ -1.05
PNKP-229ENST00000637897 WDR44Q5JSH3 913 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 CCDC183Q5T5S1 534 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 LIN9Q5TKA1 542 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 PDXDC1Q6P996 788 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 ASCL5Q7RTU5 278 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 CCDC105Q8IYK2 499 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 ATAD1Q8NBU5 361 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 FLCNQ8NFG4 579 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 MCRS1Q96EZ8 462 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 SPATA32Q96LK8 384 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 KXD1Q9BQD3 176 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 CBWD1Q9BRT8 395 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 MSTO1Q9BUK6 570 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 DDX23Q9BUQ8 820 aaKnown RBP8.51□□□□□ -1.05
PNKP-229ENST00000637897 FOXQ1Q9C009 403 aa8.51□□□□□ -1.05
PNKP-229ENST00000637897 ZHX3Q9H4I2 956 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms