RNA–Protein interactions for RNA: ENST00000637692.1

CACNA1A-245, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-245ENST00000637692 KIF4AO95239 1232 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 LINC00271P0C7V0 271 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 PBX1P40424 430 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 TNNC1P63316 161 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 PLCB2Q00722 1185 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 LRIT3Q3SXY7 679 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 FIGNQ5HY92 759 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 GPR65Q8IYL9 337 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 SLC39A11Q8N1S5 342 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 TMEM169Q96HH4 297 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 IGSF21Q96ID5 467 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 SUSD3Q96L08 255 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 PAAF1Q9BRP4 392 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 CRACR2AQ9BSW2 395 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 CYP3A43Q9HB55 503 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 MARCH5Q9NX47 278 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 DSEQ9UL01 958 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 PRG3Q9Y2Y8 225 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 PTPRSQ13332 1948 aa15.97■□□□□ 0.15
CACNA1A-245ENST00000637692 ITIH6Q6UXX5 1313 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 C5orf67F2Z3F1 127 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 M0QZQ0 153 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 PPEF2O14830 753 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 SYN3O14994 580 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 TEX33O43247 280 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 ODC1P11926 461 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 BMPR1AP36894 532 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 RABGGTBP53611 331 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 YWHAEP62258 255 aaKnown RBP15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 PLCB3Q01970 1234 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 KRT17Q04695 432 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 KCNMA1Q12791 1236 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 WDR72Q3MJ13 1102 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 FAM109BQ6ICB4 259 aaPredicted RBP15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 LIMS2Q7Z4I7 341 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 TMEM86AQ8N2M4 240 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 TOP6BLQ8N6T0 577 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 C3orf58Q8NDZ4 430 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 TGS1Q96RS0 853 aaKnown RBP15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 NUP58Q9BVL2 599 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 PBX4Q9BYU1 374 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 EDEM3Q9BZQ6 932 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 LZTS1Q9Y250 596 aa15.96■□□□□ 0.15
CACNA1A-245ENST00000637692 TDRD15B5MCY1 1934 aaKnown RBP15.96■□□□□ 0.14
CACNA1A-245ENST00000637692 LCHNA4D1U4 455 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 GRXCR1A8MXD5 290 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 HUS1O60921 280 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 TACC1O75410 805 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 EFEMP2O95967 443 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 CYP11A1P05108 521 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 CA3P07451 260 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 SLC9A1P19634 815 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 TYMPP19971 482 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 ZNF75DP51815 510 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 ERVK-21P61565 698 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 UBE3AQ05086 875 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 KLHDC7AQ5VTJ3 777 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 SPECC1LQ69YQ0 1117 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 PDXDC1Q6P996 788 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 CD300LGQ6UXG3 332 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 FMNL3Q8IVF7 1028 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 APPL2Q8NEU8 664 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 NEK11Q8NG66 645 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 SENP8Q96LD8 212 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 PCMTD1Q96MG8 357 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 C11orf84Q9BUA3 381 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 LSM14BQ9BX40 385 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 BCO2Q9BYV7 579 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 DNAI2Q9GZS0 605 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 HCSTQ9UBK5 93 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 PCDHB8Q9UN66 801 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 SNX9Q9Y5X1 595 aa15.95■□□□□ 0.14
CACNA1A-245ENST00000637692 RANBP2P49792 3224 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 CYB561D2O14569 222 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 SPTLC1O15269 473 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 AP5Z1O43299 807 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 CLSTN1O94985 981 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 CDC25BP30305 580 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 CTNNB1P35222 781 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 ASPAP45381 313 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 MFAP3P55082 362 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 TAP1Q03518 808 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 CUL2Q13617 745 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 TRIM14Q14142 442 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 TIGD5Q53EQ6 642 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 FUT10Q6P4F1 479 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 DSTYKQ6XUX3 929 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 DDX53Q86TM3 631 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 VSTM4Q8IW00 320 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 RNF168Q8IYW5 571 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 PPM1KQ8N3J5 372 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 PI4K2AQ9BTU6 479 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 OXCT2Q9BYC2 517 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 SLC28A3Q9HAS3 691 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 APOBEC3GQ9HC16 384 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 SIX2Q9NPC8 291 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 CACNG4Q9UBN1 327 aa15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 NXF1Q9UBU9 619 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-245ENST00000637692 PUF60Q9UHX1 559 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms