RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.89□□□□□ -0.19
CACNA1A-244ENST00000637625 TBC1D22BQ9NU19 505 aa13.89□□□□□ -0.19
CACNA1A-244ENST00000637625 IMPACTQ9P2X3 320 aa13.89□□□□□ -0.19
CACNA1A-244ENST00000637625 ADD3Q9UEY8 706 aaKnown RBP13.89□□□□□ -0.19
CACNA1A-244ENST00000637625 FBXO40Q9UH90 709 aa13.89□□□□□ -0.19
CACNA1A-244ENST00000637625 CCL15-CCL14A0A0B4J2E2 113 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 N4BP3O15049 544 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 NKRFO15226 690 aaKnown RBP eCLIP13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 DLX3O60479 287 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 NAT2P11245 290 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 CD247P20963 164 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 NR1I3Q14994 352 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 CCL15Q16663 113 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 FILIP1LQ4L180 1135 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 SEPT14Q6ZU15 432 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 MAEAQ7L5Y9 396 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 GUF1Q8N442 669 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 NACC1Q96RE7 527 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 THAP9Q9H5L6 903 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 NDOR1Q9UHB4 597 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 LIMA1Q9UHB6 759 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 AP4E1Q9UPM8 1137 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 PCDHA2Q9Y5H9 948 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 PFASO15067 1338 aa13.88□□□□□ -0.19
CACNA1A-244ENST00000637625 FRMD3A2A2Y4 597 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 ARHGEF35A5YM69 484 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 TPD52L2O43399 206 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 MYBP10242 640 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 DRD2P14416 443 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 KCNA2P16389 499 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 PPP1R2P41236 205 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 GSDMDP57764 484 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 CCZ1BP86790 482 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 CCZ1P86791 482 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 KRT76Q01546 638 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 SPAG1Q07617 926 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 LAPTM4AQ15012 233 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 COBLL1Q53SF7 1204 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 XRRA1Q6P2D8 792 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 ANKRD20A12PQ8NF67 263 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 RIN3Q8TB24 985 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 NEK9Q8TD19 979 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 SMCR8Q8TEV9 937 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 CTAGE1Q96RT6 745 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 TRIM8Q9BZR9 551 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 PRDM6Q9NQX0 595 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 MCM3APO60318 1980 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 WDR64B1ANS9 1081 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 SHISA8B8ZZ34 492 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 SFPQP23246 707 aaKnown RBP eCLIP13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 HP1BP3Q5SSJ5 553 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 UTP14CQ5TAP6 766 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 PLA2G4FQ68DD2 849 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 CENPPQ6IPU0 288 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 C2orf69Q8N8R5 385 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 CCDC150Q8NCX0 1101 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 SCFD1Q8WVM8 642 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 CCDC43Q96MW1 224 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 GTPBP4Q9BZE4 634 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 MKRN2Q9H000 416 aaKnown RBP13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 EMC9Q9Y3B6 208 aa13.87□□□□□ -0.19
CACNA1A-244ENST00000637625 BTBD19C9JJ37 291 aa13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 PDHXO00330 501 aa13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 TSPAN6O43657 245 aa13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 ZNF500O60304 480 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 USO1O60763 962 aaKnown RBP13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 PRPF6O94906 941 aaKnown RBP13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 CST3P01034 146 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 ADH5P11766 374 aa13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 MTIF2P46199 727 aaKnown RBP13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 QARSP47897 775 aaKnown RBP13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 JAK3P52333 1124 aa13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 STXBP2Q15833 593 aa13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 SPECC1LQ69YQ0 1117 aa13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 C1orf186Q6ZWK4 172 aa13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 DNERQ8NFT8 737 aa13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 BRI3BPQ8WY22 251 aa13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 TSG101Q99816 390 aa13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 PORCNQ9H237 461 aa13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 MRPL44Q9H9J2 332 aaKnown RBP13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 PLXNB2O15031 1838 aa13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 ARID2Q68CP9 1835 aa13.86□□□□□ -0.19
CACNA1A-244ENST00000637625 ZNFX1Q9P2E3 1918 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 B4DLN1 442 aa13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 GCNT3O95395 438 aa13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 SKILP12757 684 aa13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 POU3F2P20265 443 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 NMT1P30419 496 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 ADKP55263 362 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 UBXN1Q04323 297 aa13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 ANKRD39Q53RE8 183 aa13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 WDR75Q8IWA0 830 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 TRIM59Q8IWR1 403 aa13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 MYCT1Q8N699 235 aa13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 ANKRD13CQ8N6S4 541 aa13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 GALNT6Q8NCL4 622 aa13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 KIAA1524Q8TCG1 905 aa13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 NOC3LQ8WTT2 800 aaKnown RBP13.85□□□□□ -0.19
CACNA1A-244ENST00000637625 MMP19Q99542 508 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms