RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 TIMM13Q9Y5L4 95 aaPredicted RBP11.46□□□□□ -0.58
CLN5-213ENST00000636681 P4HA2O15460 535 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 BAIAP3O94812 1187 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 TPM3P06753 285 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 CD58P19256 250 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 LRPAP1P30533 357 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 ASPAP45381 313 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 OR1G1P47890 313 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 SLC11A1P49279 550 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 LILRA4P59901 499 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 RBP5P82980 135 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 TUSC3Q13454 348 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 CCDC142Q17RM4 750 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 PSRC1Q6PGN9 363 aaPredicted RBP11.45□□□□□ -0.58
CLN5-213ENST00000636681 NT5DC4Q86YG4 428 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 TC2NQ8N9U0 490 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 URGCPQ8TCY9 931 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 B3GALT6Q96L58 329 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 ZNF830Q96NB3 372 aaPredicted RBP11.45□□□□□ -0.58
CLN5-213ENST00000636681 UBN1Q9NPG3 1134 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 PLCB1Q9NQ66 1216 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 HMGXB4Q9UGU5 601 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 MRPL42Q9Y6G3 142 aaKnown RBP11.45□□□□□ -0.58
CLN5-213ENST00000636681 ITIH6Q6UXX5 1313 aa11.45□□□□□ -0.58
CLN5-213ENST00000636681 LRRC53A6NM62 1247 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 FOXN3O00409 490 aaPredicted RBP11.44□□□□□ -0.58
CLN5-213ENST00000636681 NRP1O14786 923 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 SSTR3P32745 418 aaPredicted RBP11.44□□□□□ -0.58
CLN5-213ENST00000636681 AP3M2P53677 418 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 ARID5AQ03989 594 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 HSP90AA2PQ14568 343 aaPredicted RBP11.44□□□□□ -0.58
CLN5-213ENST00000636681 DRAP1Q14919 205 aaPredicted RBP11.44□□□□□ -0.58
CLN5-213ENST00000636681 SGSM1Q2NKQ1 1148 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 TIGD5Q53EQ6 642 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 NT5C1BQ96P26 610 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 MRPL45Q9BRJ2 306 aaKnown RBP11.44□□□□□ -0.58
CLN5-213ENST00000636681 SNX9Q9Y5X1 595 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 NR2E3Q9Y5X4 410 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 SLC4A7Q9Y6M7 1214 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 ATG2AQ2TAZ0 1938 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 GJB5O95377 273 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 PLEKP08567 350 aaPredicted RBP11.44□□□□□ -0.58
CLN5-213ENST00000636681 SKILP12757 684 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 CYP3A5P20815 502 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 JAM2P57087 298 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 CETN1Q12798 172 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 BTG3Q14201 252 aaPredicted RBP11.44□□□□□ -0.58
CLN5-213ENST00000636681 ZNF394Q53GI3 561 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 RASIP1Q5U651 963 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 TAS1R1Q7RTX1 841 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.44□□□□□ -0.58
CLN5-213ENST00000636681 HERC6Q8IVU3 1022 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 TWNKQ96RR1 684 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 MMS19Q96T76 1030 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 GDF15Q99988 308 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 SLC38A7Q9NVC3 462 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 MARCH5Q9NX47 278 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 CAPN11Q9UMQ6 739 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 L1RE1Q9UN81 338 aa11.44□□□□□ -0.58
CLN5-213ENST00000636681 TRIOBPQ9H2D6 2365 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 KPNA7A9QM74 516 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 MFAP3LO75121 409 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 B3GAT3O94766 335 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 GFPT2O94808 682 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 GALTP07902 379 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 LINC00271P0C7V0 271 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 ATP2A2P16615 1042 aaKnown RBP11.43□□□□□ -0.58
CLN5-213ENST00000636681 ACO1P21399 889 aaKnown RBP11.43□□□□□ -0.58
CLN5-213ENST00000636681 KRT9P35527 623 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 USP8P40818 1118 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 CUL2Q13617 745 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 SOWAHAQ2M3V2 549 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 ZNF667Q5HYK9 610 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 WDR44Q5JSH3 913 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 PDXDC1Q6P996 788 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 WDR59Q6PJI9 974 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 CACNA2D4Q7Z3S7 1137 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 PPFIBP1Q86W92 1011 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 OSTM1Q86WC4 334 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 UBR7Q8N806 425 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 RNPC3Q96LT9 517 aaKnown RBP11.43□□□□□ -0.58
CLN5-213ENST00000636681 FAM193BQ96PV7 902 aaPredicted RBP11.43□□□□□ -0.58
CLN5-213ENST00000636681 PPP1R9BQ96SB3 815 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 YME1L1Q96TA2 773 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 ZBED2Q9BTP6 218 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 VN1R3Q9BXE9 311 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 NIF3L1Q9GZT8 377 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 CEP72Q9P209 647 aa11.43□□□□□ -0.58
CLN5-213ENST00000636681 SZT2Q5T011 3432 aa11.42□□□□□ -0.58
CLN5-213ENST00000636681 F8VZ95 297 aa11.42□□□□□ -0.58
CLN5-213ENST00000636681 XPOTO43592 962 aaKnown RBP11.42□□□□□ -0.58
CLN5-213ENST00000636681 DEKP35659 375 aaKnown RBP11.42□□□□□ -0.58
CLN5-213ENST00000636681 PBX2P40425 430 aa11.42□□□□□ -0.58
CLN5-213ENST00000636681 TAF6P49848 677 aa11.42□□□□□ -0.58
CLN5-213ENST00000636681 HTRA4P83105 476 aaPredicted RBP11.42□□□□□ -0.58
CLN5-213ENST00000636681 DNAAF5Q86Y56 855 aa11.42□□□□□ -0.58
CLN5-213ENST00000636681 LRRC52Q8N7C0 313 aa11.42□□□□□ -0.58
CLN5-213ENST00000636681 KBTBD7Q8WVZ9 684 aa11.42□□□□□ -0.58
CLN5-213ENST00000636681 SENP8Q96LD8 212 aa11.42□□□□□ -0.58
CLN5-213ENST00000636681 CHP1Q99653 195 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms