RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 TUBB4BP68371 445 aa7.97□□□□□ -1.13
PKP4-217ENST00000628904 NME3Q13232 169 aa7.97□□□□□ -1.13
PKP4-217ENST00000628904 UBAP2Q5T6F2 1119 aaKnown RBP7.97□□□□□ -1.13
PKP4-217ENST00000628904 FASTKD5Q7L8L6 764 aaKnown RBP7.97□□□□□ -1.13
PKP4-217ENST00000628904 TMEM35BQ8NCS4 154 aa7.97□□□□□ -1.13
PKP4-217ENST00000628904 SMARCAD1Q9H4L7 1026 aa7.97□□□□□ -1.13
PKP4-217ENST00000628904 SAYSD1Q9NPB0 183 aa7.97□□□□□ -1.13
PKP4-217ENST00000628904 LACTBL1A8MY62 500 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 TNPO2O14787 897 aaKnown RBP7.96□□□□□ -1.13
PKP4-217ENST00000628904 ADCY3O60266 1144 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 NAMPTP43490 491 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 BMT2Q1RMZ1 405 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 GNASQ5JWF2 1037 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 JADE1Q6IE81 842 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 ACAD10Q6JQN1 1059 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 TAS1R3Q7RTX0 852 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 SCUBE3Q8IX30 993 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 CCNYQ8ND76 341 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 ADAM32Q8TC27 787 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 HELQQ8TDG4 1101 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 CABS1Q96KC9 395 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 ZSWIM1Q9BR11 485 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 MYH11P35749 1972 aa7.96□□□□□ -1.13
PKP4-217ENST00000628904 SCN7AQ01118 1682 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 CAPN9O14815 690 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 PJA2O43164 708 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 CAND2O75155 1236 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 NEBLO76041 1014 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 CYP2C9P11712 490 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 CHRNB2P17787 502 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 PMS2P54278 862 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 TAS2R40P59535 323 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 P3H1Q32P28 736 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 C1orf220Q5T0J3 134 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 WDR93Q6P2C0 686 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 TEX2Q8IWB9 1127 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 CCDC63Q8NA47 563 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 MTMR14Q8NCE2 650 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 REPS2Q8NFH8 660 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 IPO4Q8TEX9 1081 aaKnown RBP7.96□□□□□ -1.14
PKP4-217ENST00000628904 HPDLQ96IR7 371 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 HESX1Q9UBX0 185 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 HMGXB4Q9UGU5 601 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 R3HDM2Q9Y2K5 976 aaKnown RBP7.96□□□□□ -1.14
PKP4-217ENST00000628904 CEP290O15078 2479 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 BCORQ6W2J9 1755 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 SYNGAP1Q96PV0 1343 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 BTBD19C9JJ37 291 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 H0YCG3 227 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 CREB3O43889 395 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 LDHAP00338 332 aaKnown RBP7.96□□□□□ -1.14
PKP4-217ENST00000628904 RPL21P46778 160 aaKnown RBP7.96□□□□□ -1.14
PKP4-217ENST00000628904 ARSEP51690 589 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 BPIFB4P59827 614 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 C15orf59Q2T9L4 293 aaPredicted RBP7.96□□□□□ -1.14
PKP4-217ENST00000628904 TTMPQ5BVD1 217 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 DCAF12L1Q5VU92 463 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 TXNRD3NBQ6F5E7 133 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 SLC13A5Q86YT5 568 aaPredicted RBP7.96□□□□□ -1.14
PKP4-217ENST00000628904 ACAP3Q96P50 834 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 B3GNT5Q9BYG0 378 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 OSBPL8Q9BZF1 889 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 HAPLN2Q9GZV7 340 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 NMRK2Q9NPI5 230 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 DMAC2Q9NW81 257 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.96□□□□□ -1.14
PKP4-217ENST00000628904 GTF3C4Q9UKN8 822 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 IKBKGQ9Y6K9 419 aa7.96□□□□□ -1.14
PKP4-217ENST00000628904 COL4A5P29400 1685 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 GPR25O00155 361 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 MAP2K7O14733 419 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 OGTO15294 1046 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 LGALS2P05162 132 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 FDX1P10109 184 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 CDH6P55285 790 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 MARSP56192 900 aaKnown RBP7.95□□□□□ -1.14
PKP4-217ENST00000628904 YWHAGP61981 247 aaKnown RBP eCLIP7.95□□□□□ -1.14
PKP4-217ENST00000628904 IFI35P80217 286 aaPredicted RBP7.95□□□□□ -1.14
PKP4-217ENST00000628904 CCL14Q16627 93 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 CCDC142Q17RM4 750 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 ZBED8Q8IZ13 594 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 MCOLN2Q8IZK6 566 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 EXOC4Q96A65 974 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 ATXN7L3BQ96GX2 97 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 ERP44Q9BS26 406 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 NUDT5Q9UKK9 219 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 MYPNQ86TC9 1320 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 RASGRF2O14827 1237 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 CST8O60676 142 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 CLTAP09496 248 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 GBP2P32456 591 aaPredicted RBP7.95□□□□□ -1.14
PKP4-217ENST00000628904 NCKAP1LP55160 1127 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 JAM2P57087 298 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 TAF5Q15542 800 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 DENND1BQ6P3S1 775 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 DARS2Q6PI48 645 aaKnown RBP7.95□□□□□ -1.14
PKP4-217ENST00000628904 RIOX2Q8IUF8 465 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 CCDC13Q8IYE1 715 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 FAM71AQ8IYT1 594 aa7.95□□□□□ -1.14
PKP4-217ENST00000628904 C4orf33Q8N1A6 199 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms