RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 ARL2BPQ9Y2Y0 163 aa20.35■□□□□ 0.85
PTBP1-220ENST00000627714 SUPT20HL2P0C7V6 817 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 MCL1Q07820 350 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 MKRN4PQ13434 485 aaPredicted RBP20.34■□□□□ 0.85
PTBP1-220ENST00000627714 RIPK1Q13546 671 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 SUPT20HL1Q3ZLR7 823 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 NUGGCQ68CJ6 796 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 CIAPIN1Q6FI81 312 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 SNRNP48Q6IEG0 339 aaKnown RBP20.34■□□□□ 0.85
PTBP1-220ENST00000627714 GSTA5Q7RTV2 222 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 PHLDB2Q86SQ0 1253 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 ANKRD35Q8N283 1001 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 RBBP8NLQ8NC74 664 aaPredicted RBP20.34■□□□□ 0.85
PTBP1-220ENST00000627714 REPS2Q8NFH8 660 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 GRAMD1AQ96CP6 724 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 MAGEB18Q96M61 343 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 TTC25Q96NG3 672 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 AS3MTQ9HBK9 375 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 STK32BQ9NY57 414 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 CTNNAL1Q9UBT7 734 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 SPATA31C2B4DYI2 1134 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 STX2P32856 288 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 ACOT2P49753 483 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 VPS41P49754 854 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 BACE1P56817 501 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 MTERF2Q49AM1 385 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 LRRC38Q5VT99 294 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 SMYD5Q6GMV2 418 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 SPOPLQ6IQ16 392 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 CRELD2Q6UXH1 353 aaPredicted RBP20.34■□□□□ 0.85
PTBP1-220ENST00000627714 SPATA21Q7Z572 469 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 ANKRD42Q8N9B4 389 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 DEPTORQ8TB45 409 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 CFAP57Q96MR6 1250 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 PORCNQ9H237 461 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 APOBEC3GQ9HC16 384 aaKnown RBP20.34■□□□□ 0.85
PTBP1-220ENST00000627714 NAALADL1Q9UQQ1 740 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 CD2APQ9Y5K6 639 aa20.34■□□□□ 0.85
PTBP1-220ENST00000627714 DOCK1Q14185 1865 aa20.33■□□□□ 0.85
PTBP1-220ENST00000627714 TJP3O95049 919 aa20.33■□□□□ 0.85
PTBP1-220ENST00000627714 GJB6O95452 261 aa20.33■□□□□ 0.85
PTBP1-220ENST00000627714 COPS2P61201 443 aa20.33■□□□□ 0.85
PTBP1-220ENST00000627714 NFX1Q12986 1120 aaKnown RBP20.33■□□□□ 0.85
PTBP1-220ENST00000627714 LLGL2Q6P1M3 1020 aa20.33■□□□□ 0.85
PTBP1-220ENST00000627714 UBN1Q9NPG3 1134 aa20.33■□□□□ 0.85
PTBP1-220ENST00000627714 ABCF3Q9NUQ8 709 aa20.33■□□□□ 0.85
PTBP1-220ENST00000627714 DNAJC17Q9NVM6 304 aaKnown RBP20.33■□□□□ 0.85
PTBP1-220ENST00000627714 EURLQ9NYK6 297 aa20.33■□□□□ 0.85
PTBP1-220ENST00000627714 GSTTP1A0A1W2PQM5 241 aa20.33■□□□□ 0.84
PTBP1-220ENST00000627714 K7ERI5 159 aa20.33■□□□□ 0.84
PTBP1-220ENST00000627714 CREB1P16220 341 aa20.33■□□□□ 0.84
PTBP1-220ENST00000627714 AP3M2P53677 418 aa20.33■□□□□ 0.84
PTBP1-220ENST00000627714 NOP14P78316 857 aaKnown RBP20.33■□□□□ 0.84
PTBP1-220ENST00000627714 GALNTL6Q49A17 601 aa20.33■□□□□ 0.84
PTBP1-220ENST00000627714 C2CD6Q53TS8 623 aa20.33■□□□□ 0.84
PTBP1-220ENST00000627714 PASD1Q8IV76 773 aa20.33■□□□□ 0.84
PTBP1-220ENST00000627714 RBM15Q96T37 977 aaKnown RBP eCLIP20.33■□□□□ 0.844e-7■■■□□ 14.9
PTBP1-220ENST00000627714 IMPG2Q9BZV3 1241 aa20.33■□□□□ 0.84
PTBP1-220ENST00000627714 PTPRJQ12913 1337 aa20.33■□□□□ 0.84
PTBP1-220ENST00000627714 MYH9P35579 1960 aaKnown RBP20.32■□□□□ 0.84
PTBP1-220ENST00000627714 LIASO43766 372 aa20.32■□□□□ 0.84
PTBP1-220ENST00000627714 CALB1P05937 261 aa20.32■□□□□ 0.84
PTBP1-220ENST00000627714 MMP8P22894 467 aa20.32■□□□□ 0.84
PTBP1-220ENST00000627714 MAP2K2P36507 400 aa20.32■□□□□ 0.84
PTBP1-220ENST00000627714 SSR1P43307 286 aaKnown RBP20.32■□□□□ 0.84
PTBP1-220ENST00000627714 MAGEA4P43358 317 aa20.32■□□□□ 0.84
PTBP1-220ENST00000627714 ZNF280AP59817 542 aaPredicted RBP20.32■□□□□ 0.84
PTBP1-220ENST00000627714 FAM133BQ5BKY9 247 aaKnown RBP20.32■□□□□ 0.84
PTBP1-220ENST00000627714 WNK4Q96J92 1243 aa20.32■□□□□ 0.84
PTBP1-220ENST00000627714 FAM84AQ96KN4 292 aa20.32■□□□□ 0.84
PTBP1-220ENST00000627714 TGS1Q96RS0 853 aaKnown RBP20.32■□□□□ 0.84
PTBP1-220ENST00000627714 MSTO1Q9BUK6 570 aa20.32■□□□□ 0.84
PTBP1-220ENST00000627714 DHX33Q9H6R0 707 aaKnown RBP20.32■□□□□ 0.84
PTBP1-220ENST00000627714 PPCSQ9HAB8 311 aa20.32■□□□□ 0.84
PTBP1-220ENST00000627714 ADAMTS5Q9UNA0 930 aa20.32■□□□□ 0.84
PTBP1-220ENST00000627714 USTQ9Y2C2 406 aa20.32■□□□□ 0.84
PTBP1-220ENST00000627714 PHIPQ8WWQ0 1821 aa20.32■□□□□ 0.84
PTBP1-220ENST00000627714 A0A0B4J269 797 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 DNALI1O14645 258 aaPredicted RBP20.31■□□□□ 0.84
PTBP1-220ENST00000627714 ATP2A1O14983 1001 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 ATP6V1G2O95670 118 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 LSM8O95777 96 aaKnown RBP20.31■□□□□ 0.84
PTBP1-220ENST00000627714 EZRP15311 586 aaKnown RBP20.31■□□□□ 0.84
PTBP1-220ENST00000627714 CD58P19256 250 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 PTPN7P35236 360 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 WNT7BP56706 349 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 P3H1Q32P28 736 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 EAPPQ56P03 285 aaPredicted RBP20.31■□□□□ 0.84
PTBP1-220ENST00000627714 FAM228AQ86W67 206 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 TDRPQ86YL5 185 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 CYP39A1Q9NYL5 469 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 ZNF214Q9UL59 606 aaPredicted RBP20.31■□□□□ 0.84
PTBP1-220ENST00000627714 MAFBQ9Y5Q3 323 aaPredicted RBP20.31■□□□□ 0.84
PTBP1-220ENST00000627714 COL11A1P12107 1806 aaPredicted RBP20.31■□□□□ 0.84
PTBP1-220ENST00000627714 UBOX5O94941 541 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 OATP04181 439 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 ZNF132P52740 706 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 IL9RQ01113 521 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 SP4Q02446 784 aa20.31■□□□□ 0.84
PTBP1-220ENST00000627714 TAP1Q03518 808 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms