RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 SNX27Q96L92 541 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 TCHPQ9BT92 498 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 KCTD10Q9H3F6 313 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 GOLGA2P5Q9HBQ8 144 aa21.64■■□□□ 1.06
R3HCC1-210ENST00000625275 PPP1R3GB7ZBB8 358 aa21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 ANKRD63C9JTQ0 380 aa21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 ABLIM1O14639 778 aa21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 TGFB1I1O43294 461 aa21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 TOM1L1O75674 476 aa21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 LETM1O95202 739 aaPredicted RBP21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 KIF20AO95235 890 aa21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 FGFR3P22607 806 aa21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 TDGQ13569 410 aa21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 UPP1Q16831 310 aa21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 ZBTB45Q96K62 511 aaPredicted RBP21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 KCNK12Q9HB15 430 aa21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 SLC38A7Q9NVC3 462 aa21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 IGSF9Q9P2J2 1179 aa21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 ANKFY1Q9P2R3 1169 aa21.64■■□□□ 1.05
R3HCC1-210ENST00000625275 SOX4Q06945 474 aaPredicted RBP21.63■■□□□ 1.05
R3HCC1-210ENST00000625275 LIN9Q5TKA1 542 aa21.63■■□□□ 1.05
R3HCC1-210ENST00000625275 ALKAL1Q6UXT8 129 aa21.63■■□□□ 1.05
R3HCC1-210ENST00000625275 ALYREFQ86V81 257 aaKnown RBP21.63■■□□□ 1.05
R3HCC1-210ENST00000625275 MLKLQ8NB16 471 aa21.63■■□□□ 1.05
R3HCC1-210ENST00000625275 ACAP3Q96P50 834 aa21.63■■□□□ 1.05
R3HCC1-210ENST00000625275 MYADMQ96S97 322 aa21.63■■□□□ 1.05
R3HCC1-210ENST00000625275 DUSP12Q9UNI6 340 aa21.63■■□□□ 1.05
R3HCC1-210ENST00000625275 ADAM12O43184 909 aa21.62■■□□□ 1.05
R3HCC1-210ENST00000625275 TRAPPC3O43617 180 aa21.62■■□□□ 1.05
R3HCC1-210ENST00000625275 HARSP12081 509 aaKnown RBP21.62■■□□□ 1.05
R3HCC1-210ENST00000625275 IGFBP6P24592 240 aaPredicted RBP21.62■■□□□ 1.05
R3HCC1-210ENST00000625275 ADSSP30520 456 aa21.62■■□□□ 1.05
R3HCC1-210ENST00000625275 STIM1Q13586 685 aa21.62■■□□□ 1.05
R3HCC1-210ENST00000625275 NOLC1Q14978 699 aaKnown RBP eCLIP21.62■■□□□ 1.05
R3HCC1-210ENST00000625275 CD300LGQ6UXG3 332 aa21.62■■□□□ 1.05
R3HCC1-210ENST00000625275 C3orf58Q8NDZ4 430 aa21.62■■□□□ 1.05
R3HCC1-210ENST00000625275 HAPLN2Q9GZV7 340 aa21.62■■□□□ 1.05
R3HCC1-210ENST00000625275 EPS15L1Q9UBC2 864 aa21.62■■□□□ 1.05
R3HCC1-210ENST00000625275 MTRRQ9UBK8 725 aa21.62■■□□□ 1.05
R3HCC1-210ENST00000625275 PSMA7O14818 248 aa21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 HNRNPA1P09651 372 aaKnown RBP eCLIP21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 KCNE1P15382 129 aa21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 PPP1R2P41236 205 aa21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 TYRO3Q06418 890 aa21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 TCF15Q12870 199 aa21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 KLHL10Q6JEL2 608 aa21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 GET4Q7L5D6 327 aaPredicted RBP21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 DDX27Q96GQ7 796 aaKnown RBP21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 DHTKD1Q96HY7 919 aaPredicted RBP21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 ZMAT2Q96NC0 199 aaKnown RBP21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 GZF1Q9H116 711 aaPredicted RBP21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 AGPAT3Q9NRZ7 376 aa21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 CNTN3Q9P232 1028 aa21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 STYXL1Q9Y6J8 313 aa21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 MIA3Q5JRA6 1907 aa21.61■■□□□ 1.05
R3HCC1-210ENST00000625275 PDXKO00764 312 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 CLDN3O15551 220 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 C8AP07357 584 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 TKTP29401 623 aaKnown RBP21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 HOXA9P31269 272 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 OR1D2P34982 312 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 MRE11P49959 708 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 MCL1Q07820 350 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 RAB33AQ14088 237 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 STX1AQ16623 288 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 ZCWPW2Q504Y3 356 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 PPM1LQ5SGD2 360 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 CENPPQ6IPU0 288 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 HS2ST1Q7LGA3 356 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 CBWD1Q9BRT8 395 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 FUCA2Q9BTY2 467 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 MFSD1Q9H3U5 465 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 CTNND2Q9UQB3 1225 aa21.6■■□□□ 1.05
R3HCC1-210ENST00000625275 A0A0B4J269 797 aa21.59■■□□□ 1.05
R3HCC1-210ENST00000625275 I3L4J1 428 aa21.59■■□□□ 1.05
R3HCC1-210ENST00000625275 PODXLO00592 558 aa21.59■■□□□ 1.05
R3HCC1-210ENST00000625275 MATR3P43243 847 aaKnown RBP eCLIP21.59■■□□□ 1.05
R3HCC1-210ENST00000625275 BRCC3P46736 316 aa21.59■■□□□ 1.05
R3HCC1-210ENST00000625275 NUBP1P53384 320 aa21.59■■□□□ 1.05
R3HCC1-210ENST00000625275 PMS1P54277 932 aaKnown RBP21.59■■□□□ 1.05
R3HCC1-210ENST00000625275 SLFN12LQ6IEE8 588 aa21.59■■□□□ 1.05
R3HCC1-210ENST00000625275 ANKS3Q6ZW76 656 aa21.59■■□□□ 1.05
R3HCC1-210ENST00000625275 NELFBQ8WX92 580 aa21.59■■□□□ 1.05
R3HCC1-210ENST00000625275 POMGNT1Q8WZA1 660 aa21.59■■□□□ 1.05
R3HCC1-210ENST00000625275 ANO10Q9NW15 660 aa21.59■■□□□ 1.05
R3HCC1-210ENST00000625275 TRAF3IP3Q9Y228 551 aa21.59■■□□□ 1.05
R3HCC1-210ENST00000625275 BACE2Q9Y5Z0 518 aa21.59■■□□□ 1.05
R3HCC1-210ENST00000625275 TRIM49BA6NDI0 452 aa21.58■■□□□ 1.05
R3HCC1-210ENST00000625275 CLIC2O15247 247 aa21.58■■□□□ 1.05
R3HCC1-210ENST00000625275 MEFVO15553 781 aaPredicted RBP21.58■■□□□ 1.05
R3HCC1-210ENST00000625275 CCDC192P0DO97 292 aa21.58■■□□□ 1.05
R3HCC1-210ENST00000625275 SNRPFP62306 86 aaKnown RBP21.58■■□□□ 1.05
R3HCC1-210ENST00000625275 ARMCX5Q6P1M9 558 aa21.58■■□□□ 1.05
R3HCC1-210ENST00000625275 TMEM105Q8N8V8 129 aa21.58■■□□□ 1.05
R3HCC1-210ENST00000625275 GOLGA5Q8TBA6 731 aa21.58■■□□□ 1.05
R3HCC1-210ENST00000625275 SLC7A14Q8TBB6 771 aa21.58■■□□□ 1.05
R3HCC1-210ENST00000625275 RSAD2Q8WXG1 361 aa21.58■■□□□ 1.05
R3HCC1-210ENST00000625275 MSTO1Q9BUK6 570 aa21.58■■□□□ 1.05
R3HCC1-210ENST00000625275 CGNQ9P2M7 1197 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms