RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 ZNF512Q96ME7 567 aaPredicted RBP4.13□□□□□ -1.75
CDKL5-208ENST00000624953 TCF25Q9BQ70 676 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 SLC13A1Q9BZW2 595 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 C12orf65Q9H3J6 166 aaKnown RBP4.13□□□□□ -1.75
CDKL5-208ENST00000624953 IFT122Q9HBG6 1241 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 TLR9Q9NR96 1032 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 AURKAIP1Q9NWT8 199 aaPredicted RBP4.13□□□□□ -1.75
CDKL5-208ENST00000624953 FAM30AQ9NZY2 134 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 RNF181Q9P0P0 153 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 DPP7Q9UHL4 492 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 PCDHGA9Q9Y5G4 932 aaKnown RBP4.13□□□□□ -1.75
CDKL5-208ENST00000624953 PCDHGA8Q9Y5G5 932 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 PCDHGA7Q9Y5G6 932 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 PCDHGA6Q9Y5G7 932 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 PCDHGA3Q9Y5H0 932 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 PCDHGA2Q9Y5H1 932 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 GPR45Q9Y5Y3 372 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 INSRP06213 1382 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 COL4A5P29400 1685 aa4.13□□□□□ -1.75
CDKL5-208ENST00000624953 BRCA2P51587 3418 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 GOLGA8AA7E2F4 631 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 GOLGA8BA8MQT2 603 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 ALG1L2C9J202 215 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 GYPEP15421 78 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 GUCY1A2P33402 732 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 CRHR1P34998 444 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 SLC6A9P48067 706 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 ZXDAP98168 799 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 SRSF2Q01130 221 aaKnown RBP4.12□□□□□ -1.75
CDKL5-208ENST00000624953 MALLQ13021 153 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 HS1BP3Q53T59 392 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 MBNL2Q5VZF2 373 aaKnown RBP4.12□□□□□ -1.75
CDKL5-208ENST00000624953 LMBR1LQ6UX01 489 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 RHOUQ7L0Q8 258 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 ZNF572Q7Z3I7 529 aaPredicted RBP4.12□□□□□ -1.75
CDKL5-208ENST00000624953 TMPRSS6Q8IU80 811 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 ANKRD35Q8N283 1001 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 CHST13Q8NET6 341 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 GPR156Q8NFN8 814 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 ATL2Q8NHH9 583 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 TGFBRAP1Q8WUH2 860 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 MIEF2Q96C03 454 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 TESK2Q96S53 571 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 SIN3AQ96ST3 1273 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 CPEB1Q9BZB8 566 aaKnown RBP4.12□□□□□ -1.75
CDKL5-208ENST00000624953 ASPSCR1Q9BZE9 553 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 GREM2Q9H772 168 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 GPRC5DQ9NZD1 345 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 SIK3Q9Y2K2 1263 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 CGNL1Q0VF96 1302 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 RPTORQ8N122 1335 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 TONSLQ96HA7 1378 aa4.12□□□□□ -1.75
CDKL5-208ENST00000624953 DLG5Q8TDM6 1919 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 HTTP42858 3142 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 FYB1O15117 783 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 XPAP23025 273 aaPredicted RBP4.11□□□□□ -1.75
CDKL5-208ENST00000624953 SREBF1P36956 1147 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 SCNN1GP51170 649 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 SCAND1P57086 179 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 TOB2Q14106 344 aaPredicted RBP4.11□□□□□ -1.75
CDKL5-208ENST00000624953 SEPT2Q15019 361 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 PTPROQ16827 1216 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 FKBP15Q5T1M5 1219 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 METRNLQ641Q3 311 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 DRICH1Q6PGQ1 229 aaPredicted RBP4.11□□□□□ -1.75
CDKL5-208ENST00000624953 Q6ZRM9 215 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 SPRED1Q7Z699 444 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 TRMT2AQ8IZ69 625 aaKnown RBP4.11□□□□□ -1.75
CDKL5-208ENST00000624953 FAM177A1Q8N128 213 aaPredicted RBP4.11□□□□□ -1.75
CDKL5-208ENST00000624953 D2HGDHQ8N465 521 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 SLC16A11Q8NCK7 471 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 ZNF480Q8WV37 535 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 FATE1Q969F0 183 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 ADOQ96SZ5 270 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 ZNF747Q9BV97 191 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 QRSL1Q9H0R6 528 aaKnown RBP4.11□□□□□ -1.75
CDKL5-208ENST00000624953 DEF6Q9H4E7 631 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 BCO1Q9HAY6 547 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 TYW1Q9NV66 732 aaKnown RBP4.11□□□□□ -1.75
CDKL5-208ENST00000624953 DKK2Q9UBU2 259 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 SRP68Q9UHB9 627 aaKnown RBP4.11□□□□□ -1.75
CDKL5-208ENST00000624953 TUBD1Q9UJT1 453 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 EDARQ9UNE0 448 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 FLT4P35916 1363 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 CNTNAP1P78357 1384 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 SZT2Q5T011 3432 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 MRC1P22897 1456 aa4.11□□□□□ -1.75
CDKL5-208ENST00000624953 KDM3BQ7LBC6 1761 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 RBBP6Q7Z6E9 1792 aaKnown RBP4.1□□□□□ -1.75
CDKL5-208ENST00000624953 ZNF646O15015 1829 aaPredicted RBP4.1□□□□□ -1.75
CDKL5-208ENST00000624953 GLTPD2A6NH11 291 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 POLRMTO00411 1230 aaKnown RBP4.1□□□□□ -1.75
CDKL5-208ENST00000624953 PHF2O75151 1096 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 PEX11BO96011 259 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 FSHBP01225 129 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 PHKG2P15735 406 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 ALOX15P16050 662 aaPredicted RBP4.1□□□□□ -1.75
CDKL5-208ENST00000624953 CASRP41180 1078 aa4.1□□□□□ -1.75
CDKL5-208ENST00000624953 IARSP41252 1262 aaKnown RBP4.1□□□□□ -1.75
CDKL5-208ENST00000624953 AMPHP49418 695 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms