RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 SLITRK6Q9H5Y7 841 aa11.97□□□□□ -0.49
LINC00963-214ENST00000622680 TMEM134Q9H6X4 195 aa11.97□□□□□ -0.49
LINC00963-214ENST00000622680 ZNF334Q9HCZ1 680 aaPredicted RBP11.97□□□□□ -0.49
LINC00963-214ENST00000622680 ASAH2Q9NR71 780 aa11.97□□□□□ -0.49
LINC00963-214ENST00000622680 YIPF1Q9Y548 306 aa11.97□□□□□ -0.49
LINC00963-214ENST00000622680 TIMM13Q9Y5L4 95 aaPredicted RBP11.97□□□□□ -0.49
LINC00963-214ENST00000622680 TNRC6BQ9UPQ9 1833 aaKnown RBP11.97□□□□□ -0.49
LINC00963-214ENST00000622680 ADAMTS9Q9P2N4 1935 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 ZNF197O14709 1029 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 SEC24BO95487 1268 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 TGM1P22735 817 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 RPL9P32969 192 aaKnown RBP11.96□□□□□ -0.49
LINC00963-214ENST00000622680 SOX9P48436 509 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 GUCY2FP51841 1108 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 SATB1Q01826 763 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 SPEM2Q0P670 501 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 ZRSR1Q15695 479 aaKnown RBP11.96□□□□□ -0.49
LINC00963-214ENST00000622680 IL17AQ16552 155 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 SLC10A6Q3KNW5 377 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 WDR44Q5JSH3 913 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 STXBP5Q5T5C0 1151 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 CYP4A22Q5TCH4 519 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 IQCEQ6IPM2 695 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 RINT1Q6NUQ1 792 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 PRR23BQ6ZRT6 265 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 C1orf186Q6ZWK4 172 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 GPIHBP1Q8IV16 184 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 ZSCAN18Q8TBC5 510 aaPredicted RBP11.96□□□□□ -0.49
LINC00963-214ENST00000622680 FAM3CQ92520 227 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 IRF7Q92985 503 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 SECISBP2LQ93073 1101 aaKnown RBP11.96□□□□□ -0.49
LINC00963-214ENST00000622680 MMTAG2Q9BU76 263 aaKnown RBP11.96□□□□□ -0.49
LINC00963-214ENST00000622680 HAPLN2Q9GZV7 340 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 CRISPLD1Q9H336 500 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 AFF4Q9UHB7 1163 aaKnown RBP11.96□□□□□ -0.49
LINC00963-214ENST00000622680 GMEB2Q9UKD1 530 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 CDV3Q9UKY7 258 aaKnown RBP11.96□□□□□ -0.49
LINC00963-214ENST00000622680 NOL7Q9UMY1 257 aaKnown RBP11.96□□□□□ -0.49
LINC00963-214ENST00000622680 DNM3Q9UQ16 869 aa11.96□□□□□ -0.49
LINC00963-214ENST00000622680 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.96□□□□□ -0.49
LINC00963-214ENST00000622680 A0A1W2PRU2 124 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 DCDC2BA2VCK2 349 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 SLC38A8A6NNN8 435 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 HEPACAM2A8MVW5 462 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 ARNTLO00327 626 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 MAN2B1O00754 1011 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 CCNE1P24864 410 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 HOXC13P31276 330 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 TNFSF9P41273 254 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 TRAPPC10P48553 1259 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 CDR1P51861 262 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 EPHA5P54756 1037 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 CACNB1Q02641 598 aaPredicted RBP11.95□□□□□ -0.5
LINC00963-214ENST00000622680 LMNB2Q03252 620 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 DMWDQ09019 674 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 SRSF5Q13243 272 aaKnown RBP11.95□□□□□ -0.5
LINC00963-214ENST00000622680 GAS6Q14393 721 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 KRT79Q5XKE5 535 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 TTC9BQ8N6N2 239 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 DEPDC1BQ8WUY9 529 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 ZNF512Q96ME7 567 aaPredicted RBP11.95□□□□□ -0.5
LINC00963-214ENST00000622680 PLIN2Q99541 437 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 DNAJC25Q9H1X3 360 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 LMAN1LQ9HAT1 526 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 RBM12Q9NTZ6 932 aaKnown RBP11.95□□□□□ -0.5
LINC00963-214ENST00000622680 PCDHB8Q9UN66 801 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 LIMCH1Q9UPQ0 1083 aa11.95□□□□□ -0.5
LINC00963-214ENST00000622680 NPHP3-ACAD11A0A0J9YXS1 232 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 PPEF2O14830 753 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 ZNF263O14978 683 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 TOM1L1O75674 476 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 SOAT2O75908 522 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 KRT37O76014 449 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 MICAL2O94851 1124 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 MATR3P43243 847 aaKnown RBP eCLIP11.94□□□□□ -0.5
LINC00963-214ENST00000622680 YWHAHQ04917 246 aaPredicted RBP11.94□□□□□ -0.5
LINC00963-214ENST00000622680 STRN3Q13033 797 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 PDIA5Q14554 519 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 Q6ZS52 159 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 TMC8Q8IU68 726 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 GPR161Q8N6U8 529 aaKnown RBP11.94□□□□□ -0.5
LINC00963-214ENST00000622680 FAM184AQ8NB25 1140 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 TMEM161BQ8NDZ6 487 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 APPL2Q8NEU8 664 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 BEST2Q8NFU1 509 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 TTC8Q8TAM2 541 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 LLPHQ9BRT6 129 aaKnown RBP11.94□□□□□ -0.5
LINC00963-214ENST00000622680 LRRC3Q9BY71 257 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 FAM126AQ9BYI3 521 aaPredicted RBP11.94□□□□□ -0.5
LINC00963-214ENST00000622680 RAB34Q9BZG1 259 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 C2orf42Q9NWW7 574 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 RBM19Q9Y4C8 960 aaKnown RBP11.94□□□□□ -0.5
LINC00963-214ENST00000622680 GON4LQ3T8J9 2241 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 PLXND1Q9Y4D7 1925 aa11.94□□□□□ -0.5
LINC00963-214ENST00000622680 CHURC1-FNTBB4DL54 471 aa11.93□□□□□ -0.5
LINC00963-214ENST00000622680 M0QZQ0 153 aa11.93□□□□□ -0.5
LINC00963-214ENST00000622680 MAPTP10636 758 aaKnown RBP11.93□□□□□ -0.5
LINC00963-214ENST00000622680 CHRNB1P11230 501 aa11.93□□□□□ -0.5
LINC00963-214ENST00000622680 U2AF2P26368 475 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINC00963-214ENST00000622680 MARCKSP29966 332 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms